RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MED27Q6P2C8 311 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■■■■■ 69.6
HDDC2-209ENST00000609477 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 DTWD1Q8N5C7 304 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 TEX9Q8N6V9 391 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 SRFBP1Q8NEF9 429 aaKnown RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 OR51Q1Q8NH59 317 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 MZB1Q8WU39 189 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 GAL3ST3Q96A11 431 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 REPS1Q96D71 796 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 MOCOSQ96EN8 888 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 ABHD17AQ96GS6 310 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 MAGEB10Q96LZ2 347 aaPredicted RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 MACROD1Q9BQ69 325 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 YIPF2Q9BWQ6 316 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 NPLQ9BXD5 320 aaPredicted RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 C1QTNF3Q9BXJ4 246 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 MLXIPLQ9NP71 852 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 ZNF358Q9NW07 568 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 C3orf18Q9UK00 162 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 ZNF490Q9ULM2 529 aaPredicted RBP13.52□□□□□ -0.25
HDDC2-209ENST00000609477 ASB1Q9Y576 335 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 PCDHGA11Q9Y5H2 935 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
HDDC2-209ENST00000609477 NUP210LQ5VU65 1888 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 SGK494L7N484 410 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 E2F3O00716 465 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 SOCS6O14544 535 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PRAMEF4O60810 478 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 HEXBP07686 556 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PIK3CBP42338 1070 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 XCR1P46094 333 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 CCT5P48643 541 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ARFIP1P53367 373 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 AP2B1P63010 937 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
HDDC2-209ENST00000609477 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 DEFB134Q4QY38 66 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PRAMEF9Q5VWM5 478 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 GRHL2Q6ISB3 625 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 KIRREL2Q6UWL6 708 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ZC3H7AQ8IWR0 971 aaKnown RBP13.51□□□□□ -0.25
HDDC2-209ENST00000609477 TMEM151AQ8N4L1 468 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PTGR2Q8N8N7 351 aaPredicted RBP13.51□□□□□ -0.25
HDDC2-209ENST00000609477 OR2L5Q8NG80 312 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 FAR2Q96K12 515 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 NTMT1Q9BV86 223 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ROPN1BQ9BZX4 212 aaPredicted RBP13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ROGDIQ9GZN7 287 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 IPPKQ9H8X2 491 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 ROPN1Q9HAT0 212 aaPredicted RBP13.51□□□□□ -0.25
HDDC2-209ENST00000609477 PSD3Q9NYI0 1048 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
HDDC2-209ENST00000609477 LOC102723996A0A087X1L8 192 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 H0YIV9 168 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 HPP00738 406 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 STATHP02808 62 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 SHBGP04278 402 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 ZNF888P0CJ79 500 aaPredicted RBP13.5□□□□□ -0.25
HDDC2-209ENST00000609477 ACPPP15309 386 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 KRT15P19012 456 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 CD22P20273 847 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 JAK1P23458 1154 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
HDDC2-209ENST00000609477 CCL11P51671 97 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 NAA20P61599 178 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 ERCC6LQ2NKX8 1250 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 TMEM35AQ53FP2 167 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 LACTB2Q53H82 288 aaPredicted RBP13.5□□□□□ -0.25
HDDC2-209ENST00000609477 TRIM40Q6P9F5 258 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 TMEM205Q6UW68 189 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 PRSS41Q7RTY9 318 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 GOLGA7Q7Z5G4 137 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 SLC22A9Q8IVM8 553 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 MREGQ8N565 214 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 L3MBTL4Q8NA19 623 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 OR7G3Q8NG95 312 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 CCDC126Q96EE4 140 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 PHF21BQ96EK2 531 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 SLC25A23Q9BV35 468 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 TRIM55Q9BYV6 548 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 SEMA4CQ9C0C4 833 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
HDDC2-209ENST00000609477 ACTR8Q9H981 624 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 C5AR2Q9P296 337 aa13.5□□□□□ -0.25
HDDC2-209ENST00000609477 C19orf25Q9UFG5 118 aaPredicted RBP13.5□□□□□ -0.25
HDDC2-209ENST00000609477 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms