RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 C1orf226A1L170 272 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 RNF13O43567 381 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 MTX2O75431 263 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 RORAP35398 523 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 DLX2Q07687 328 aaPredicted RBP19.79■□□□□ 0.76
UPF1-207ENST00000599848 TRAM2Q15035 370 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 GPR137CQ8N3F9 429 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 ABHD5Q8WTS1 349 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 CLEC4CQ8WTT0 213 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 NPY6RQ99463 290 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 TBC1D24Q9ULP9 559 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 ADAMTS4O75173 837 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 THEGLP0DJG4 465 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 PDHA2P29803 388 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 CHRNA4P43681 627 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 CDK10Q15131 360 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 CRTC2Q53ET0 693 aaPredicted RBP19.79■□□□□ 0.76
UPF1-207ENST00000599848 GPR107Q5VW38 600 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 TOR1AIP2Q8NFQ8 470 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 OR5M3Q8NGP4 307 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 HS6ST2Q96MM7 605 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 CFAP20Q9Y6A4 193 aaKnown RBP19.79■□□□□ 0.76
UPF1-207ENST00000599848 hCG_2039718K7EN88 272 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 BRINP1O60477 761 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 ASGR2P07307 311 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 MLLT1Q03111 559 aaPredicted RBP19.79■□□□□ 0.76
UPF1-207ENST00000599848 AHSA2Q719I0 299 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 ZNF283Q8N7M2 679 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 FRS2Q8WU20 508 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 OR5P2Q8WZ92 322 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 WASF2Q9Y6W5 498 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 NPPAP01160 153 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 ACSL1P33121 698 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 PTCHD3Q3KNS1 767 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 NPAS3Q8IXF0 933 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 SLC5A8Q8N695 610 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 OSTF1Q92882 214 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 NXPE3Q969Y0 559 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 PYCR2Q96C36 320 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 FAM84AQ96KN4 292 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 S100A14Q9HCY8 104 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 TMEM14AQ9Y6G1 99 aa19.79■□□□□ 0.76
UPF1-207ENST00000599848 TRBC2A0A5B9 178 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 HYAL2Q12891 473 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 LMAN2Q12907 356 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 LDLRAD1Q5T700 205 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 SLCO6A1Q86UG4 719 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PPP1R35Q8TAP8 253 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ATG12O94817 140 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 JUNP05412 331 aaKnown RBP19.78■□□□□ 0.76
UPF1-207ENST00000599848 HTR1AP08908 422 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 SERTAD2Q14140 314 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 TPRG1LQ5T0D9 272 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ZNF627Q7L945 461 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 MFSD2AQ8NA29 543 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 KCNN1Q92952 543 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 NEDD4LQ96PU5 975 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 NODALQ96S42 347 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 VSTM2BA6NLU5 285 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PRH1P02810 166 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 RPLP0P05388 317 aaKnown RBP19.78■□□□□ 0.76
UPF1-207ENST00000599848 CDH1P12830 882 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 RPA4Q13156 261 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 FLYWCH1Q4VC44 716 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 OSTM1Q86WC4 334 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 CLEC1AQ8NC01 280 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ZDHHC1Q8WTX9 485 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PWWP2AQ96N64 755 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 TBC1D17Q9HA65 648 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ZNF451Q9Y4E5 1061 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 J3KR12 359 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ENTPD6O75354 484 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 BCHEP06276 602 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 OR12D2P58182 307 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PON2Q15165 354 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 CA9Q16790 459 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 HGSNATQ68CP4 663 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 CEACAM20Q6UY09 585 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PLEKHG7Q6ZR37 379 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 P2RY8Q86VZ1 359 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 GALNT12Q8IXK2 581 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 MED28Q9H204 178 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PCDHB14Q9Y5E9 798 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.78■□□□□ 0.76
UPF1-207ENST00000599848 PRSS51A0A1B0GVH4 220 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 ENGP17813 658 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 UQCRC2P22695 453 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 OTX2P32243 289 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 MEF2AQ02078 507 aaPredicted RBP19.78■□□□□ 0.76
UPF1-207ENST00000599848 TMEM63BQ5T3F8 832 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 RAET1LQ5VY80 246 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 Q6ZVL8 140 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 SLC51AQ86UW1 340 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.78■□□□□ 0.76
UPF1-207ENST00000599848 FEM1AQ9BSK4 669 aa19.78■□□□□ 0.76
UPF1-207ENST00000599848 A0A1B0GVC2 190 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 A8MVJ9 347 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 RAD51DO75771 328 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 DRD2P14416 443 aa19.77■□□□□ 0.76
UPF1-207ENST00000599848 HOXC13P31276 330 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms