RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SLC6A16Q9GZN6 736 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 EPB41L4BQ9H329 900 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 NT5DC2Q9H857 520 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 GPR83Q9NYM4 423 aa26.68■■□□□ 1.86
SSBP4-206ENST00000599699 PSMC3IPQ9P2W1 217 aaPredicted RBP26.68■■□□□ 1.86
SSBP4-206ENST00000599699 PCDHGA9Q9Y5G4 932 aaKnown RBP26.68■■□□□ 1.86
SSBP4-206ENST00000599699 IQANK1A0A1B0GTG1 560 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 GALR3O60755 368 aaPredicted RBP26.67■■□□□ 1.86
SSBP4-206ENST00000599699 PRAMEF4O60810 478 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 ALOX12BO75342 701 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 SLU7O95391 586 aaKnown RBP26.67■■□□□ 1.86
SSBP4-206ENST00000599699 B3GALT4O96024 378 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 EPORP19235 508 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 STXBP1P61764 594 aaKnown RBP26.67■■□□□ 1.86
SSBP4-206ENST00000599699 LAPTM5Q13571 262 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 PRAMEF9Q5VWM5 478 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 NIPAL1Q6NVV3 410 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 GALNT16Q8N428 558 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 OR11G2Q8NGC1 345 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 UTP15Q8TED0 518 aaKnown RBP26.67■■□□□ 1.86
SSBP4-206ENST00000599699 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.67■■□□□ 1.86
SSBP4-206ENST00000599699 C8orf44Q96CB5 159 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 KLHL31Q9H511 634 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 PCSK5Q92824 1860 aa26.67■■□□□ 1.86
SSBP4-206ENST00000599699 JRKO75564 520 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 CEACAM4O75871 244 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 GSTM2P28161 218 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 OR5T3Q8NGG3 340 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 WDR34Q96EX3 536 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 MESP1Q9BRJ9 268 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 XPR1Q9UBH6 696 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 FETUBQ9UGM5 382 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 TBK1Q9UHD2 729 aa26.66■■□□□ 1.86
SSBP4-206ENST00000599699 TNPO3Q9Y5L0 923 aaKnown RBP26.66■■□□□ 1.86
SSBP4-206ENST00000599699 KLK8O60259 260 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 SMIM24O75264 130 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 OLR1P78380 273 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 HYAL2Q12891 473 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 AIMP2Q13155 320 aaKnown RBP26.65■■□□□ 1.86
SSBP4-206ENST00000599699 TBCCQ15814 346 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 TIFABQ6ZNK6 161 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 SHISA5Q8N114 240 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 METTL21AQ8WXB1 218 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 PHF21BQ96EK2 531 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 PEX11GQ96HA9 241 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 SEC16BQ96JE7 1060 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 FAR2Q96K12 515 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 NUDT9Q9BW91 350 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 RBCK1Q9BYM8 510 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 COPG2Q9UBF2 871 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF490Q9ULM2 529 aaPredicted RBP26.65■■□□□ 1.86
SSBP4-206ENST00000599699 TMCO1Q9UM00 188 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 MED13Q9UHV7 2174 aa26.65■■□□□ 1.86
SSBP4-206ENST00000599699 LRRC14BA6NHZ5 514 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 CLEC3AO75596 197 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 PDGFAP04085 211 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 CD22P20273 847 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 ITGA3P26006 1051 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 EEF1A2Q05639 463 aaKnown RBP26.64■■□□□ 1.86
SSBP4-206ENST00000599699 NAA30Q147X3 362 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-206ENST00000599699 MYLK4Q86YV6 388 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-206ENST00000599699 PTGR2Q8N8N7 351 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-206ENST00000599699 UBE2E3Q969T4 207 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 MRPL57Q9BQC6 102 aaKnown RBP26.64■■□□□ 1.86
SSBP4-206ENST00000599699 VN1R1Q9GZP7 353 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF451Q9Y4E5 1061 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 SCN3AQ9NY46 2000 aa26.64■■□□□ 1.86
SSBP4-206ENST00000599699 ZNF462Q96JM2 2506 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 CHST10O43529 356 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 SLC28A2O43868 658 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 SIX3O95343 332 aaPredicted RBP26.63■■□□□ 1.85
SSBP4-206ENST00000599699 PCNAP12004 261 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 HPDP32754 393 aaPredicted RBP26.63■■□□□ 1.85
SSBP4-206ENST00000599699 CASP2P42575 452 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 BTN3A2P78410 334 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 PCBP2Q15366 365 aaKnown RBP eCLIP26.63■■□□□ 1.855e-27■■■■■ 121.4
SSBP4-206ENST00000599699 IRAK1BP1Q5VVH5 260 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 PARP9Q8IXQ6 854 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 TEX19Q8NA77 164 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 GAL3ST3Q96A11 431 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 MRPL46Q9H2W6 279 aaKnown RBP26.63■■□□□ 1.85
SSBP4-206ENST00000599699 ZNF160Q9HCG1 818 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 MLXIPLQ9NP71 852 aa26.63■■□□□ 1.85
SSBP4-206ENST00000599699 LRIT2A6NDA9 550 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 PCDH17O14917 1159 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 ERI3O43414 337 aaKnown RBP26.62■■□□□ 1.85
SSBP4-206ENST00000599699 WFS1O76024 890 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 HPP00738 406 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 SHBGP04278 402 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 C8orf89P0DMQ9 161 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 IL10P22301 178 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 EEF1DP29692 281 aaKnown RBP26.62■■□□□ 1.85
SSBP4-206ENST00000599699 PIK3CGP48736 1102 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 VSNL1P62760 191 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 KLRB1Q12918 225 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 GTF2H2Q13888 395 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 MYBPC3Q14896 1274 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 ADNP2Q6IQ32 1131 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 GTF2H2CQ6P1K8 395 aa26.62■■□□□ 1.85
SSBP4-206ENST00000599699 MED27Q6P2C8 311 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms