RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SLC6A16Q9GZN6 736 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 KLHL31Q9H511 634 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 CLK4Q9HAZ1 481 aaKnown RBP14.21□□□□□ -0.13
LIG1-215ENST00000597901 LANCL2Q9NS86 450 aa14.21□□□□□ -0.13
LIG1-215ENST00000597901 RELNP78509 3460 aa14.21□□□□□ -0.14
LIG1-215ENST00000597901 HEATR5BQ9P2D3 2071 aa14.21□□□□□ -0.14
LIG1-215ENST00000597901 ANKUB1A6NFN9 424 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 NCF1BA6NI72 391 aaPredicted RBP14.2□□□□□ -0.14
LIG1-215ENST00000597901 A8MUI8 341 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 NCF1CA8MVU1 366 aaPredicted RBP14.2□□□□□ -0.14
LIG1-215ENST00000597901 FAM155BO75949 473 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 SERPINA6P08185 405 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 NCF1P14598 390 aaPredicted RBP14.2□□□□□ -0.14
LIG1-215ENST00000597901 GNAZP19086 355 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 GGT5P36269 586 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 KCNC1P48547 511 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 ATP6V0D1P61421 351 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 SKP1P63208 163 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 OLR1P78380 273 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 SLC7A5Q01650 507 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 GUCY2DQ02846 1103 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 KBTBD12Q3ZCT8 623 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 CDKL4Q5MAI5 379 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 PLAG1Q6DJT9 500 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 ABHD13Q7L211 337 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 GRHL3Q8TE85 626 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 FBF1Q8TES7 1133 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 FAR1Q8WVX9 515 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 TBC1D20Q96BZ9 403 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 UBXN10Q96LJ8 280 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 CAPS2Q9BXY5 557 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 HECTD1Q9ULT8 2610 aa14.2□□□□□ -0.14
LIG1-215ENST00000597901 FLNCQ14315 2725 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 URADA6NGE7 173 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 MAGEB17A8MXT2 336 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 B4GALT2O60909 372 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 CDC123O75794 336 aaPredicted RBP14.19□□□□□ -0.14
LIG1-215ENST00000597901 WDPCPO95876 746 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 F10P00742 488 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 UQCRHP07919 91 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 FHP07954 510 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 TNFSF10P50591 281 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 RAB10P61026 200 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 ELOAQ14241 798 aaKnown RBP14.19□□□□□ -0.14
LIG1-215ENST00000597901 OR4D1Q15615 310 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 ZKSCAN8Q15776 578 aaPredicted RBP14.19□□□□□ -0.14
LIG1-215ENST00000597901 BTBD16Q32M84 506 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 SFT2D3Q587I9 215 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 ABHD17BQ5VST6 288 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 SULT1C3Q6IMI6 304 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 H3F3CQ6NXT2 135 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 TMIGD1Q6UXZ0 262 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 TCAIMQ8N3R3 496 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 M1APQ8TC57 530 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 SSC4DQ8WTU2 575 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 ESAMQ96AP7 390 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 LRRC1Q9BTT6 524 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 RBCK1Q9BYM8 510 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 AICDAQ9GZX7 198 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
LIG1-215ENST00000597901 MDC1Q14676 2089 aaKnown RBP14.18□□□□□ -0.14
LIG1-215ENST00000597901 TRAV17A0A0B4J275 112 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 GMPRP36959 345 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 ABRAXAS2Q15018 415 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 C4orf17Q53FE4 359 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 FBXO48Q5FWF7 155 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 TOR1AIP1Q5JTV8 583 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 ISCA2Q86U28 154 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 ST6GALNAC3Q8NDV1 305 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 TSLPQ969D9 159 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 KIAA1191Q96A73 305 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 ZNF354BQ96LW1 612 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 PTCHD1Q96NR3 888 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 TMEM79Q9BSE2 394 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 RNF32Q9H0A6 362 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.14
LIG1-215ENST00000597901 CNOT10Q9H9A5 744 aaKnown RBP14.18□□□□□ -0.14
LIG1-215ENST00000597901 KCNK13Q9HB14 408 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 DNAJC11Q9NVH1 559 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 GPRC5BQ9NZH0 403 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 CD274Q9NZQ7 290 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 TEKT2Q9UIF3 430 aa14.18□□□□□ -0.14
LIG1-215ENST00000597901 PTBP2Q9UKA9 531 aaKnown RBP14.18□□□□□ -0.14
LIG1-215ENST00000597901 ZNF490Q9ULM2 529 aaPredicted RBP14.18□□□□□ -0.14
LIG1-215ENST00000597901 SPENQ96T58 3664 aaKnown RBP14.18□□□□□ -0.14
LIG1-215ENST00000597901 ESYT3A0FGR9 886 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 LRIT2A6NDA9 550 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 FAM227AF5H4B4 570 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 CLGNO14967 610 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 PRMT3O60678 531 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 PRAMEF4O60810 478 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 STK16O75716 305 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 URI1O94763 535 aaPredicted RBP14.17□□□□□ -0.14
LIG1-215ENST00000597901 JAK1P23458 1154 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 CRABP2P29373 138 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 STX2P32856 288 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 HSPA7P48741 367 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 OR4D2P58180 307 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 BTN3A2P78410 334 aa14.17□□□□□ -0.14
LIG1-215ENST00000597901 BTG2P78543 158 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms