RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 KRT71Q3SY84 523 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 C10orf62Q5T681 223 aaPredicted RBP24.43■■□□□ 1.5
TRIM28-204ENST00000594806 BORAQ6PGQ7 559 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF483Q8TF39 744 aaPredicted RBP24.43■■□□□ 1.5
TRIM28-204ENST00000594806 CCT6BQ92526 530 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 GAL3ST3Q96A11 431 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 SMIM10Q96HG1 83 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 UBL7Q96S82 380 aaPredicted RBP24.43■■□□□ 1.5
TRIM28-204ENST00000594806 SPSB2Q99619 263 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 IQCGQ9H095 443 aaKnown RBP24.43■■□□□ 1.5
TRIM28-204ENST00000594806 CTSFQ9UBX1 484 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 EMCNQ9ULC0 261 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 A0A088AWK7 358 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 LRIT2A6NDA9 550 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 PLIN3O60664 434 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 GALR3O60755 368 aaPredicted RBP24.42■■□□□ 1.5
TRIM28-204ENST00000594806 KLHL18O94889 574 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 OTCP00480 354 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 PROCP04070 461 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 ZGLP1P0C6A0 271 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 MYL2P10916 166 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF10P21506 573 aaPredicted RBP24.42■■□□□ 1.5
TRIM28-204ENST00000594806 PIK3CBP42338 1070 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 PHEXP78562 749 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 TGM3Q08188 693 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 ADPRMQ3LIE5 342 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 LRIG3Q6UXM1 1119 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 ZYG11AQ6WRX3 759 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 C4orf33Q8N1A6 199 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 LSM14AQ8ND56 463 aaKnown RBP24.42■■□□□ 1.5
TRIM28-204ENST00000594806 SRFBP1Q8NEF9 429 aaKnown RBP24.42■■□□□ 1.5
TRIM28-204ENST00000594806 OR7G3Q8NG95 312 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 PPP4R1Q8TF05 950 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 TTC9Q92623 222 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 L3HYPDHQ96EM0 354 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 APOPT1Q96IL0 206 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 VPS50Q96JG6 964 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 SEMA3GQ9NS98 782 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 STK38LQ9Y2H1 464 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 NAALAD2Q9Y3Q0 740 aa24.42■■□□□ 1.5
TRIM28-204ENST00000594806 CFAP47Q6ZTR5 3102 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 OR7A17O14581 309 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 PCDH17O14917 1159 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 CYC1P08574 325 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF888P0CJ79 500 aaPredicted RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 COL9A2Q14055 689 aaPredicted RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 TBR1Q16650 682 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 GGTA1PQ4G0N0 100 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 TOR1AIP1Q5JTV8 583 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF678Q5SXM1 525 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 BEND6Q5SZJ8 279 aaPredicted RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 VN1R5Q7Z5H4 357 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 MYLK4Q86YV6 388 aaPredicted RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 SRRM1Q8IYB3 904 aaKnown RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 BANPQ8N9N5 519 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF473Q8WTR7 871 aaKnown RBP24.41■■□□□ 1.5
TRIM28-204ENST00000594806 SMC6Q96SB8 1091 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 YIPF2Q9BWQ6 316 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 ZBTB26Q9HCK0 441 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 PSD3Q9NYI0 1048 aa24.41■■□□□ 1.5
TRIM28-204ENST00000594806 RGS16O15492 202 aaPredicted RBP24.4■■□□□ 1.5
TRIM28-204ENST00000594806 FURINP09958 794 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 ATXN8OSP0DMR3 200 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 MMP11P24347 488 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 CCR10P46092 362 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 DEFB109BQ30KR1 87 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 DEFB134Q4QY38 66 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 TMEM35AQ53FP2 167 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 PRSS41Q7RTY9 318 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 PDSS2Q86YH6 399 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 OR2L5Q8NG80 312 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 OR51Q1Q8NH59 317 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 APOBEC4Q8WW27 367 aaKnown RBP24.4■■□□□ 1.5
TRIM28-204ENST00000594806 MS4A6EQ96DS6 147 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 CMTM7Q96FZ5 175 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 FAR2Q96K12 515 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 ZIM3Q96PE6 472 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 REXO4Q9GZR2 422 aaKnown RBP24.4■■□□□ 1.5
TRIM28-204ENST00000594806 SEMA4BQ9NPR2 832 aaPredicted RBP24.4■■□□□ 1.5
TRIM28-204ENST00000594806 RRAGDQ9NQL2 400 aaPredicted RBP24.4■■□□□ 1.5
TRIM28-204ENST00000594806 MAN2B2Q9Y2E5 1009 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 PLLPQ9Y342 182 aa24.4■■□□□ 1.5
TRIM28-204ENST00000594806 G3V2L1 256 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 SGK494L7N484 410 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 SUPT7LO94864 414 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 UMODP07911 640 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 PCNAP12004 261 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 ARL1P40616 181 aaPredicted RBP24.39■■□□□ 1.49
TRIM28-204ENST00000594806 CLCQ05315 142 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 KLC1Q07866 573 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 VWA2Q5GFL6 755 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 ATP1A1-AS1Q5TC04 95 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 TRIM40Q6P9F5 258 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 CHSY3Q70JA7 882 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 MILR1Q7Z6M3 343 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 APLFQ8IW19 511 aaPredicted RBP24.39■■□□□ 1.49
TRIM28-204ENST00000594806 MYRIPQ8NFW9 859 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 OR52B6Q8NGF0 335 aa24.39■■□□□ 1.49
TRIM28-204ENST00000594806 NSUN5Q96P11 429 aaKnown RBP24.39■■□□□ 1.49
TRIM28-204ENST00000594806 OR1F2PQ96R84 312 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms