RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
APOC1-209ENST00000592885 CATSPEREQ5SY80 951 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 TMEM207Q6UWW9 146 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 TMPRSS11BQ86T26 416 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 THOC6Q86W42 341 aaKnown RBP12.48□□□□□ -0.41
APOC1-209ENST00000592885 CREG2Q8IUH2 290 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 KLHDC8AQ8IYD2 350 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 TMEM178AQ8NBL3 297 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 FAM98AQ8NCA5 519 aaKnown RBP12.48□□□□□ -0.41
APOC1-209ENST00000592885 TTLQ8NG68 377 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 OR5T3Q8NGG3 340 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 ELP5Q8TE02 316 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 UTP15Q8TED0 518 aaKnown RBP12.48□□□□□ -0.41
APOC1-209ENST00000592885 TSLPQ969D9 159 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 SCMH1Q96GD3 660 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 VPS39Q96JC1 886 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 SEC16BQ96JE7 1060 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 NAPGQ99747 312 aaPredicted RBP12.48□□□□□ -0.41
APOC1-209ENST00000592885 RBCK1Q9BYM8 510 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 MOCS1Q9NZB8 636 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 RNF14Q9UBS8 474 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 SAR1BQ9Y6B6 198 aa12.48□□□□□ -0.41
APOC1-209ENST00000592885 ASPDHA6ND91 283 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 GABRR3A8MPY1 467 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 CHST10O43529 356 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 CDC123O75794 336 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 SERPIND1P05546 499 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 SERPINA6P08185 405 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 ZNF888P0CJ79 500 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 RNH1P13489 461 aaKnown RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 CD46P15529 392 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 MST1P26927 711 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 EEF1DP29692 281 aaKnown RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 HPDP32754 393 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 CA7P43166 264 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 CASP6P55212 293 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 OR1C1Q15619 314 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 NXPE4Q6UWF7 544 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 FRA10AC1Q70Z53 315 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 FBXO36Q8NEA4 188 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 ARMC2Q8NEN0 867 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 THAP3Q8WTV1 239 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 TSNARE1Q96NA8 513 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 PITHD1Q9GZP4 211 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 SPNS1Q9H2V7 528 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 COPG2Q9UBF2 871 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
APOC1-209ENST00000592885 PSAT1Q9Y617 370 aa12.47□□□□□ -0.41
APOC1-209ENST00000592885 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 IGKV3D-11A0A0A0MRZ8 115 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TRGV8A0A0C4DH27 118 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TCRBV16S1A1N1A0A5B0 115 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 NPEPPSL1A6NEC2 478 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 OR2W5A6NFC9 320 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SAGE2PA6NJ88 616 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 PSMD12O00232 456 aaPredicted RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 PRMT3O60678 531 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SMIM10L1P0DMW3 83 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 GNAZP19086 355 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 STXBP1P61764 594 aaKnown RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 GNG11P61952 73 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 PDIA2Q13087 525 aaKnown RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 ART3Q13508 389 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TERF2Q15554 542 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 FCRLBQ6BAA4 426 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 ANKMY2Q8IV38 441 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SHISA5Q8N114 240 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TCAIMQ8N3R3 496 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 GAL3ST3Q96A11 431 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SMIM10Q96HG1 83 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 GPR137Q96N19 417 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 PWWP2AQ96N64 755 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SIGLEC12Q96PQ1 595 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 NPAS2Q99743 824 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 EGFL8Q99944 293 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TRIM51Q9BSJ1 452 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 CAPS2Q9BXY5 557 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.41
APOC1-209ENST00000592885 GPAMQ9HCL2 828 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms