RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CRLF3Q8IUI8 442 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 IGDCC3Q8IVU1 814 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 SPNS2Q8IVW8 549 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 NEIL2Q969S2 332 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 MARVELD3Q96A59 401 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 SEC16BQ96JE7 1060 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 AIF1LQ9BQI0 150 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 SLC6A16Q9GZN6 736 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 TRIM45Q9H8W5 580 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-205ENST00000592333 TEX264Q9Y6I9 313 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 KCNE2Q9Y6J6 123 aa17.73■□□□□ 0.43
CCDC43-205ENST00000592333 SYNDIG1LA6NDD5 238 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 PRSS44E7EML9 344 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 CCL21O00585 134 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 CHST10O43529 356 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 ZNF37AP17032 561 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-205ENST00000592333 GSTM2P28161 218 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 ELK3P41970 407 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 SLC26A5P58743 744 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 NAA30Q147X3 362 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-205ENST00000592333 PPP1R3AQ16821 1122 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 DEFB134Q4QY38 66 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 BNC2Q6ZN30 1099 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-205ENST00000592333 Q6ZPB1 254 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-205ENST00000592333 ARMC10Q8N2F6 343 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 GPR137Q96N19 417 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 PLAC1Q9HBJ0 212 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 NSMCE4AQ9NXX6 385 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 ZNF835Q9Y2P0 537 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 DYRK1BQ9Y463 629 aa17.72■□□□□ 0.43
CCDC43-205ENST00000592333 GABRR3A8MPY1 467 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 PRMT3O60678 531 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SLC19A2O60779 497 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SERPINA6P08185 405 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SMIM10L1P0DMW3 83 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 ARL4CP56559 192 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 REEP5Q00765 189 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 CATSPEREQ5SY80 951 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 MRGPRGQ86SM5 289 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 RPS19BP1Q86WX3 136 aaKnown RBP17.71■□□□□ 0.43
CCDC43-205ENST00000592333 ARMC2Q8NEN0 867 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 TTLQ8NG68 377 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 OR5T3Q8NGG3 340 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 UTP15Q8TED0 518 aaKnown RBP17.71■□□□□ 0.43
CCDC43-205ENST00000592333 MOCOSQ96EN8 888 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 CCDC120Q96HB5 630 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SMIM10Q96HG1 83 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SIGLEC12Q96PQ1 595 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 NPAS2Q99743 824 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 OLFM1Q99784 485 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 CAPS2Q9BXY5 557 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 PITHD1Q9GZP4 211 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-205ENST00000592333 POPDC3Q9HBV1 291 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 ZFATQ9P243 1243 aa17.71■□□□□ 0.43
CCDC43-205ENST00000592333 SCN3AQ9NY46 2000 aa17.71■□□□□ 0.42
CCDC43-205ENST00000592333 OR2W5A6NFC9 320 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 BANF1O75531 89 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 CDC123O75794 336 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-205ENST00000592333 GUCA1CO95843 209 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 SP1P08047 785 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 RNH1P13489 461 aaKnown RBP17.7■□□□□ 0.42
CCDC43-205ENST00000592333 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 HPDP32754 393 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-205ENST00000592333 PTGER4P35408 488 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 ALDH6A1Q02252 535 aaKnown RBP17.7■□□□□ 0.42
CCDC43-205ENST00000592333 TERF2Q15554 542 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 FCRLBQ6BAA4 426 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 SLC25A25Q6KCM7 469 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 NXPE4Q6UWF7 544 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 THOC6Q86W42 341 aaKnown RBP17.7■□□□□ 0.42
CCDC43-205ENST00000592333 KLHDC8AQ8IYD2 350 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 TSLPQ969D9 159 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 VPS39Q96JC1 886 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 PTCHD1Q96NR3 888 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 PRDM9Q9NQV7 894 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 MOCS1Q9NZB8 636 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 LRFN1Q9P244 771 aa17.7■□□□□ 0.42
CCDC43-205ENST00000592333 IGKV3D-11A0A0A0MRZ8 115 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 TCRBV16S1A1N1A0A5B0 115 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ZNF860A6NHJ4 632 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 SAGE2PA6NJ88 616 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 CCDC188H7C350 402 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 PSMD12O00232 456 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 NEURL1O76050 574 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 SERPIND1P05546 499 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ZNF888P0CJ79 500 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 GNAZP19086 355 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 TRHRP34981 398 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 CYB561P49447 251 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 SMSP52788 366 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 DR1Q01658 176 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 MGAT5Q09328 741 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ZNF630Q2M218 657 aaPredicted RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 SPINK14Q6IE38 97 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 TRMT10BQ6PF06 316 aaKnown RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ADAMTSL2Q86TH1 951 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ZC3HC1Q86WB0 502 aaKnown RBP17.69■□□□□ 0.42
CCDC43-205ENST00000592333 SHISA5Q8N114 240 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 EID3Q8N140 333 aa17.69■□□□□ 0.42
CCDC43-205ENST00000592333 ANKRD53Q8N9V6 530 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms