RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZNF33BQ06732 778 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 CRYMQ14894 314 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 FASTKD3Q14CZ7 662 aaKnown RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 TRADDQ15628 312 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 EXT1Q16394 746 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ACER2Q5QJU3 275 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 CAPN13Q6MZZ7 669 aaPredicted RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 C8orf74Q6P047 294 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 MTFR2Q6P444 385 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 KIAA0408Q6ZU52 694 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 LANCL3Q6ZV70 420 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ANKRD37Q7Z713 158 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 STRA8Q7Z7C7 330 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 GALNT7Q86SF2 657 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ASPGQ86U10 573 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SLC26A11Q86WA9 606 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 CCDC25Q86WR0 208 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 C17orf64Q86WR6 236 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 PDSS2Q86YH6 399 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 CNTN4Q8IWV2 1026 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 MFSD9Q8NBP5 474 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 OR56A3Q8NH54 315 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 GABPB2Q8TAK5 448 aaPredicted RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SLC13A3Q8WWT9 602 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ITLN2Q8WWU7 325 aaPredicted RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 OR1F2PQ96R84 312 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 MACROD1Q9BQ69 325 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 HAUS8Q9BT25 410 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 NAT9Q9BTE0 207 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 LRRC1Q9BTT6 524 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ATG10Q9H0Y0 220 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 MMP25Q9NPA2 562 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SAYSD1Q9NPB0 183 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SEC14L3Q9UDX4 400 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 TRMT6Q9UJA5 497 aaKnown RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 SH2B3Q9UQQ2 575 aa9.8□□□□□ -0.84
VPS4B-207ENST00000591519 UTP11Q9Y3A2 253 aaKnown RBP9.8□□□□□ -0.84
VPS4B-207ENST00000591519 LRBAP50851 2863 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 IGHV3-20A0A0C4DH32 117 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 FEZF1A0PJY2 475 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 OR2W5A6NFC9 320 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 A8MUI8 341 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 MAGEB17A8MXT2 336 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 SGK494L7N484 410 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 KIF2AO00139 706 aaPredicted RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 TP73O15350 636 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 UNC5CO95185 931 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 TSPAN12O95859 305 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 HIST1H2AGP0C0S8 130 aaPredicted RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PRF1P14222 555 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 IL1RNP18510 177 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 HIST1H2ADP20671 130 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 TNFRSF8P28908 595 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 GRK3P35626 688 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 CD96P40200 585 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 CA7P43166 264 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PLTPP55058 493 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 AP1S2P56377 157 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 IL2P60568 153 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 RHAGQ02094 409 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 NAE1Q13564 534 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PWP1Q13610 501 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 HERC3Q15034 1050 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PHKG1Q16816 387 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 MEP1AQ16819 746 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 BTBD16Q32M84 506 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 MINDY4Q4G0A6 757 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 KRTCAP3Q53RY4 240 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 SPANXN3Q5MJ09 141 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 DUPD1Q68J44 220 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 NIPAL1Q6NVV3 410 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 ZNF572Q7Z3I7 529 aaPredicted RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PALM2Q8IXS6 379 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 ZBED8Q8IZ13 594 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 LGI4Q8N135 537 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 MDS2Q8NDY4 140 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 FBXO36Q8NEA4 188 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 KIF18AQ8NI77 898 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 THAP3Q8WTV1 239 aaPredicted RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 SCMH1Q96GD3 660 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 PDLIM5Q96HC4 596 aaKnown RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 HIST1H2AHQ96KK5 128 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 NDNQ99608 321 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 HIST1H2AJQ99878 128 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 WDR83Q9BRX9 315 aaKnown RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 H2AFJQ9BTM1 129 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 RAB17Q9H0T7 212 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 CLK4Q9HAZ1 481 aaKnown RBP9.79□□□□□ -0.84
VPS4B-207ENST00000591519 LANCL2Q9NS86 450 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 GRHL1Q9NZI5 618 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 WHRNQ9P202 907 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 ZNF835Q9Y2P0 537 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 NAALAD2Q9Y3Q0 740 aa9.79□□□□□ -0.84
VPS4B-207ENST00000591519 TRBC2A0A5B9 178 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 CTAGE15A4D2H0 777 aa9.78□□□□□ -0.84
VPS4B-207ENST00000591519 ASPDHA6ND91 283 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms