RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 AFAP1L2Q8N4X5 818 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 ANKRD53Q8N9V6 530 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 UTP15Q8TED0 518 aaKnown RBP11.42□□□□□ -0.58
TPM4-212ENST00000590180 RHOXF2Q9BQY4 288 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 VN1R1Q9GZP7 353 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 VPS11Q9H270 941 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 RHBGQ9H310 441 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 SNX15Q9NRS6 342 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 NFU1Q9UMS0 254 aa11.42□□□□□ -0.58
TPM4-212ENST00000590180 DOCK10Q96BY6 2186 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 IGHV3-20A0A0C4DH32 117 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 HMX2A2RU54 273 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 ANKDD1BA6NHY2 528 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 UBXN8O00124 270 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 PCDH17O14917 1159 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 GALR3O60755 368 aaPredicted RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 B4GALT2O60909 372 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 CDC123O75794 336 aaPredicted RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 SERPINA6P08185 405 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 IL10P22301 178 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 MSH2P43246 934 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 BTN3A2P78410 334 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 FOXK1P85037 733 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 IRF9Q00978 393 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 IRF8Q02556 426 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 ACTN3Q08043 901 aaPredicted RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 CHIT1Q13231 466 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 DOC2AQ14183 400 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 PDK4Q16654 411 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 SLC6A19Q695T7 634 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 NIPAL1Q6NVV3 410 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 KLC3Q6P597 504 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 TMEM205Q6UW68 189 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 ISLR2Q6UXK2 745 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 LINC00696Q6ZRV3 163 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 CPEB2Q7Z5Q1 589 aaKnown RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 ATCAYQ86WG3 371 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 PDPRQ8NCN5 879 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 TTLQ8NG68 377 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 DNAJB14Q8TBM8 379 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 CPT1CQ8TCG5 803 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 CREB3L4Q8TEY5 395 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 PNPLA2Q96AD5 504 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 FAR2Q96K12 515 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 RBCK1Q9BYM8 510 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 CD244Q9BZW8 370 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 ILKAPQ9H0C8 392 aaPredicted RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 NT5DC2Q9H857 520 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 RIC8BQ9NVN3 520 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 NUDT4Q9NZJ9 180 aa11.41□□□□□ -0.58
TPM4-212ENST00000590180 C19orf25Q9UFG5 118 aaPredicted RBP11.41□□□□□ -0.58
TPM4-212ENST00000590180 A0A087WUV0 522 aaPredicted RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 LOC102723996A0A087X1L8 192 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 IGHV1-45A0A0A0MS14 117 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SYCE1LA8MT33 242 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 KERAO60938 352 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 KLHL2O95198 593 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SERPINA7P05543 415 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ICAM2P13598 275 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 GFAPP14136 432 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ECHS1P30084 290 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 CD97P48960 835 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 AGTR2P50052 363 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SERPINB8P50452 374 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SERPINB9P50453 376 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 STXBP1P61764 594 aaKnown RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 HYAL2Q12891 473 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 LAPTM5Q13571 262 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ACAP2Q15057 778 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 INPP5JQ15735 1006 aaPredicted RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 NSDHLQ15738 373 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 IGFL3Q6UXB1 125 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 LANCL3Q6ZV70 420 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 TAOK1Q7L7X3 1001 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 LRRC70Q7Z2Q7 622 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM4-212ENST00000590180 PLPP5Q8NEB5 264 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SLC44A1Q8WWI5 657 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 TBC1D20Q96BZ9 403 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 PTCD3Q96EY7 689 aaKnown RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 MAGEB10Q96LZ2 347 aaPredicted RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 LMF1Q96S06 567 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ATOH8Q96SQ7 321 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 TUBB6Q9BUF5 446 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 FUT8Q9BYC5 575 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SLC6A16Q9GZN6 736 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ZNF700Q9H0M5 742 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 EHD1Q9H4M9 534 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 PTGFRNQ9P2B2 879 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 OPTCQ9UBM4 332 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ZNF490Q9ULM2 529 aaPredicted RBP11.4□□□□□ -0.58
TPM4-212ENST00000590180 B3GNT3Q9Y2A9 372 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 ANGPTL3Q9Y5C1 460 aa11.4□□□□□ -0.58
TPM4-212ENST00000590180 SCN2AQ99250 2005 aa11.4□□□□□ -0.59
TPM4-212ENST00000590180 FLNBO75369 2602 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 A0A0G2JN53 185 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms