RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 RAB3IL1Q8TBN0 382 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 AGAP11Q8TF27 550 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF473Q8WTR7 871 aaKnown RBP18.63■□□□□ 0.57
CIRBP-220ENST00000588917 CCT6BQ92526 530 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 MOCOSQ96EN8 888 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 DPH1Q9BZG8 443 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 SLC6A16Q9GZN6 736 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 CLK4Q9HAZ1 481 aaKnown RBP18.63■□□□□ 0.57
CIRBP-220ENST00000588917 ANKHQ9HCJ1 492 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 NMRK1Q9NWW6 199 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 PPT2Q9UMR5 302 aa18.63■□□□□ 0.57
CIRBP-220ENST00000588917 LOC400499M0QZD8 3231 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 A0A088AWK7 358 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 LRIT2A6NDA9 550 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 TMEM114B3SHH9 223 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 RAD1O60671 282 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ULK1O75385 1050 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 CRCPO75575 148 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 SERPINE1P05121 402 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 CAPN1P07384 714 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF10P21506 573 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-220ENST00000588917 RORAP35398 523 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ARFIP1P53367 373 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 WDR4P57081 412 aaKnown RBP18.62■□□□□ 0.57
CIRBP-220ENST00000588917 CYP4F2P78329 520 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 RCN2Q14257 317 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 CHI3L2Q15782 390 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 PRAMEF17Q5VTA0 474 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ATG16L1Q676U5 607 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 LETMD1Q6P1Q0 360 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 CDYL2Q8N8U2 506 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 KCT2Q8NC54 265 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 HUS1BQ8NHY5 278 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 SNIP1Q8TAD8 396 aaKnown RBP18.62■□□□□ 0.57
CIRBP-220ENST00000588917 WDR20Q8TBZ3 569 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 MGARPQ8TDB4 240 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 SYNPO2LQ9H987 977 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 LHX9Q9NQ69 397 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ACSS2Q9NR19 701 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 DHCR7Q9UBM7 475 aaKnown RBP18.62■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF225Q9UK10 706 aa18.62■□□□□ 0.57
CIRBP-220ENST00000588917 H0YIG0 161 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 P2RX6O15547 441 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 RRP8O43159 456 aaKnown RBP18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ONECUT2O95948 504 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 FGF4P08620 206 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 UROSP10746 265 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ALOX12P18054 663 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 STX3Q13277 289 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ADPRMQ3LIE5 342 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ARL13AQ5H913 290 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-220ENST00000588917 TIPARPQ7Z3E1 657 aaKnown RBP18.61■□□□□ 0.57
CIRBP-220ENST00000588917 CACNA2D3Q8IZS8 1091 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 IL22RA1Q8N6P7 574 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 SELENOMQ8WWX9 145 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 MR1Q95460 341 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 NKD1Q969G9 470 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 FAR2Q96K12 515 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 MACROD1Q9BQ69 325 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 EFHD1Q9BUP0 239 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ROGDIQ9GZN7 287 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 REXO4Q9GZR2 422 aaKnown RBP18.61■□□□□ 0.57
CIRBP-220ENST00000588917 BRF2Q9HAW0 419 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF304Q9HCX3 659 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 MLXIPLQ9NP71 852 aa18.61■□□□□ 0.57
CIRBP-220ENST00000588917 UBFD1O14562 309 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 NSA2O95478 260 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 CHEK2O96017 543 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 HSD3B1P14060 373 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 HSD3B2P26439 372 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 HYAL2Q12891 473 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 CUL3Q13618 768 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 DDX39BQ13838 428 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 NKAIN1Q4KMZ8 207 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 TOR1AIP1Q5JTV8 583 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 DEPDC1Q5TB30 811 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 TRIM40Q6P9F5 258 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 ZNF517Q6ZMY9 492 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 ZCCHC23Q6ZST2 131 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 VN1R5Q7Z5H4 357 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 CUZD1Q86UP6 607 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 CLYBLQ8N0X4 340 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 ARHGEF39Q8N4T4 335 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 GBP7Q8N8V2 638 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 OR2L5Q8NG80 312 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 UTP15Q8TED0 518 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 GAL3ST3Q96A11 431 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 KIAA1143Q96AT1 154 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 MTFMTQ96DP5 389 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 C10orf90Q96M02 699 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 GBP5Q96PP8 586 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 MTERF1Q99551 399 aaKnown RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 SERPINI1Q99574 410 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 MS4A8Q9BY19 250 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 PFDN4Q9NQP4 134 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 AHSPQ9NZD4 102 aa18.6■□□□□ 0.57
CIRBP-220ENST00000588917 GPN3Q9UHW5 284 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-220ENST00000588917 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms