RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ACPTQ9BZG2 426 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 FARSBQ9NSD9 589 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 SLC12A4Q9UP95 1085 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 TMED5Q9Y3A6 229 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PCDHB3Q9Y5E6 796 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 PCDHGA8Q9Y5G5 932 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 USH1CQ9Y6N9 552 aa16.17■□□□□ 0.18
SCAMP4-211ENST00000588907 DCDC2BA2VCK2 349 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 ACPPP15309 386 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 HTR6P50406 440 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 BTKQ06187 659 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 MAD2L1Q13257 205 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 ATP6AP1LQ52LC2 224 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 OR1L3Q8NH93 324 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 MTFMTQ96DP5 389 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 TAAR9Q96RI9 348 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 TBCDQ9BTW9 1192 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 NUF2Q9BZD4 464 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 SLC7A5P2Q9GIP4 190 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 TUBB1Q9H4B7 451 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 CLK4Q9HAZ1 481 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 OCIAD1Q9NX40 245 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 SLC39A1Q9NY26 324 aa16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 RUVBL1Q9Y265 456 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-211ENST00000588907 HYKKA2RU49 373 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 H3BMH7 237 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 P2RX6O15547 441 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ERI3O43414 337 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 TGFB1P01137 390 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 LINC00032P0C843 101 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ACSM2AQ08AH3 577 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 TARDBPQ13148 414 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 NR6A1Q15406 480 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 TOR1AIP1Q5JTV8 583 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 SPDYAQ5MJ70 313 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ACSM2BQ68CK6 577 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ADNP2Q6IQ32 1131 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ACAD11Q709F0 780 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 CPLX4Q7Z7G2 160 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 TMEM126BQ8IUX1 230 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 PROKR1Q8TCW9 393 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 MS4A6EQ96DS6 147 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 PRR11Q96HE9 360 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 EPN3Q9H201 632 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 COPS7BQ9H9Q2 264 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ANKHQ9HCJ1 492 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 C1orf109Q9NX04 203 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 KLHL14Q9P2G3 628 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 ADAM29Q9UKF5 820 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 CDC14AQ9UNH5 594 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 PCDHGA3Q9Y5H0 932 aa16.15■□□□□ 0.18
SCAMP4-211ENST00000588907 KNTC1P50748 2209 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 HCRTR1O43613 425 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 CPNE3O75131 537 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 SCRG1O75711 98 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 MYO1DO94832 1006 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 ALOX12P18054 663 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 MAPK1P28482 360 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 GSTM5P46439 218 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 IRX1P78414 480 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 HYAL2Q12891 473 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 HKDC1Q2TB90 917 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 AP5B1Q2VPB7 878 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 RHBDD2Q6NTF9 364 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 PRMT9Q6P2P2 845 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 EPGNQ6UW88 154 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 NUDT13Q86X67 352 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 METTL4Q8N3J2 472 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 ACTRT2Q8TDY3 377 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 UTP15Q8TED0 518 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 TUBGCP3Q96CW5 907 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 MAELQ96JY0 434 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 HBEGFQ99075 208 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 DPH2Q9BQC3 489 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 OR51B5Q9H339 312 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 SYNPO2LQ9H987 977 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 LRTM1Q9HBL6 345 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 NPHS2Q9NP85 383 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 CUTCQ9NTM9 273 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 TXLNGQ9NUQ3 528 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 MRGBPQ9NV56 204 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 SIRT5Q9NXA8 310 aa16.14■□□□□ 0.17
SCAMP4-211ENST00000588907 ARHGAP10A1A4S6 786 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 H0YIG0 161 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 ZNF195O14628 629 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 DSCR3O14972 297 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 LSM1O15116 133 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 DIAPH2O60879 1101 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SCELO95171 688 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 NSA2O95478 260 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 TBX6O95947 436 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SMIM10L1P0DMW3 83 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 CCL4P13236 92 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 HNRNPH1P31943 449 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SSR2P43308 183 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 GCGRP47871 477 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 AVPR1BP47901 424 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 AQP5P55064 265 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 HMGCS1Q01581 520 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 GALNT18Q6P9A2 607 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms