RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, human

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM4B-204	ENST00000588166	RUVBL1	Q9Y265	456 aa	Known RBP	13.94	□□□□□ -0.18
KDM4B-204	ENST00000588166	PTRH2	Q9Y3E5	179 aa	Known RBP	13.94	□□□□□ -0.18
KDM4B-204	ENST00000588166	CSAG2	Q9Y5P2	127 aa		13.94	□□□□□ -0.18
KDM4B-204	ENST00000588166		V9GYY5	206 aa	Predicted RBP	13.94	□□□□□ -0.18
KDM4B-204	ENST00000588166	SCN3A	Q9NY46	2000 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	C2CD3	Q4AC94	2353 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	UBXN8	O00124	270 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	TAPBP	O15533	448 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	PRPF4	O43172	522 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	H2AFY	O75367	372 aa	Known RBP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	GFAP	P14136	432 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	PRF1	P14222	555 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	POU3F2	P20265	443 aa	Predicted RBP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	CXCR2	P25025	360 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	PDK4	Q16654	411 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	ERCC6L	Q2NKX8	1250 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	C18orf21	Q32NC0	220 aa	Predicted RBP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	NKAIN1	Q4KMZ8	207 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	TECRL	Q5HYJ1	363 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	MLIP	Q5VWP3	458 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	PRMT9	Q6P2P2	845 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	TIFAB	Q6ZNK6	161 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	LCA5	Q86VQ0	697 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	SNX31	Q8N9S9	440 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	MFSD9	Q8NBP5	474 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	AEN	Q8WTP8	325 aa	Known RBP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	UBTD2	Q8WUN7	234 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	FKBP10	Q96AY3	582 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	MVB12A	Q96EY5	273 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	SCYL1	Q96KG9	808 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	GPR78	Q96P69	363 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	SARG	Q9BW04	601 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	CD244	Q9BZW8	370 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLC22A11	Q9NSA0	550 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	IFT80	Q9P2H3	777 aa	Predicted RBP	13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	CDC14A	Q9UNH5	594 aa		13.93	□□□□□ -0.18
KDM4B-204	ENST00000588166	F8	P00451	2351 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	CLGN	O14967	610 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	OR1F1	O43749	312 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	CCNT2	O60583	730 aa	Known RBP	13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	ONECUT2	O95948	504 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	IGHE	P01854	428 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLC35G6	P0C7Q6	338 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	AHR	P35869	848 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	HSD17B3	P37058	310 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	BCL6	P41182	706 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	FOLR3	P41439	243 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	GDF5	P43026	501 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	KCNC1	P48547	511 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	ALDH18A1	P54886	795 aa	Known RBP	13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	REEP5	Q00765	189 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	HKDC1	Q2TB90	917 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	CATSPERE	Q5SY80	951 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	IGFL2	Q6UWQ7	119 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	VN1R4	Q7Z5H5	301 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	ASPG	Q86U10	573 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	TDRP	Q86YL5	185 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLC34A3	Q8N130	599 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	PLD6	Q8N2A8	252 aa	Known RBP	13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	ZADH2	Q8N4Q0	377 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	ACMSD	Q8TDX5	336 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	DRC3	Q9H069	523 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	EHD1	Q9H4M9	534 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	CPSF2	Q9P2I0	782 aa	Known RBP	13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	OPTC	Q9UBM4	332 aa		13.92	□□□□□ -0.18
KDM4B-204	ENST00000588166	HIVEP1	P15822	2718 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	FEZF1	A0PJY2	475 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	PEX12	O00623	359 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	MAP2K7	O14733	419 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	P2RX6	O15547	441 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	KLHL41	O60662	606 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SMIM24	O75264	130 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	CDH16	O75309	829 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ALB	P02768	609 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	C1GALT1C1L	P0DN25	315 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	MTHFD2	P13995	350 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ITGAX	P20702	1163 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	MEF2A	Q02078	507 aa	Predicted RBP	13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	FAM53B	Q14153	422 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ELOA	Q14241	798 aa	Known RBP	13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLC9A5	Q14940	896 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SETDB1	Q15047	1291 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	RASA2	Q15283	850 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ATG9B	Q674R7	924 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLCO4C1	Q6ZQN7	724 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SRRM1	Q8IYB3	904 aa	Known RBP	13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	KRT78	Q8N1N4	520 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	SLC13A3	Q8WWT9	602 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	TM9SF4	Q92544	642 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	CAVIN3	Q969G5	261 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ESAM	Q96AP7	390 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	C10orf90	Q96M02	699 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	WDR77	Q9BQA1	342 aa	Predicted RBP	13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	MRPL57	Q9BQC6	102 aa	Known RBP	13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	PARD6B	Q9BYG5	372 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ZNF304	Q9HCX3	659 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	XPR1	Q9UBH6	696 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	TBK1	Q9UHD2	729 aa		13.91	□□□□□ -0.18
KDM4B-204	ENST00000588166	ZFP69B	Q9UJL9	534 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms