RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CAPN5O15484 640 aaPredicted RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 KLHL18O94889 574 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 HOXB3P14651 431 aaPredicted RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 HTR1EP28566 365 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 PTPN6P29350 595 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 BSGP35613 385 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 GRIA3P42263 894 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 HHEXQ03014 270 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 C2orf80Q0P641 193 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 RNF111Q6ZNA4 994 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 IKBIPQ70UQ0 350 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 R3HCC1LQ7Z5L2 792 aaKnown RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 TRPV3Q8NET8 790 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 OR2A14Q96R47 310 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 TWSG1Q9GZX9 223 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ATAD3AQ9NVI7 634 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ATP6V1HQ9UI12 483 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 SNX13Q9Y5W8 968 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 GON4LQ3T8J9 2241 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 TCRBV3S1A0A5B6 114 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 LRIT2A6NDA9 550 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 B4DGG1 531 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ARPC2O15144 300 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ZW10O43264 779 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 FURINP09958 794 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 UGT2B7P16662 529 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ATP6V1B2P21281 511 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 SOX11P35716 441 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 VHLP40337 213 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 HNRNPFP52597 415 aaKnown RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 MAPK12P53778 367 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 MC1RQ01726 317 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 DMWDQ09019 674 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 AASDHQ4L235 1098 aaPredicted RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ANXA8L1Q5VT79 327 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 FAM71E1Q6IPT2 247 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 LCN8Q6JVE9 175 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 NUDT13Q86X67 352 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 C1orf216Q8TAB5 229 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 FLVCR1-AS1Q8TAF5 88 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 AURKBQ96GD4 344 aaPredicted RBP18.96■□□□□ 0.63
TRIM47-204ENST00000587339 IKZF5Q9H5V7 419 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 ACTR10Q9NZ32 417 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 SPASTQ9UBP0 616 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 AP3M1Q9Y2T2 418 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 PCDHGA4Q9Y5G9 962 aa18.96■□□□□ 0.63
TRIM47-204ENST00000587339 HOXB9P17482 250 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-204ENST00000587339 TMEM35AQ53FP2 167 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 MAMSTRQ6ZN01 415 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 PAQR7Q86WK9 346 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 SPPL2CQ8IUH8 684 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 RBM12BQ8IXT5 1001 aaKnown RBP18.95■□□□□ 0.62
TRIM47-204ENST00000587339 CLECL1Q8IZS7 167 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 OR10A6Q8NH74 314 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 PPCDCQ96CD2 204 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 MTERF3Q96E29 417 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 ZNF583Q96ND8 569 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 BHLHE41Q9C0J9 482 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-204ENST00000587339 CD320Q9NPF0 282 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 MIEF1Q9NQG6 463 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 USP22Q9UPT9 525 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 ENTPD2Q9Y5L3 495 aa18.95■□□□□ 0.62
TRIM47-204ENST00000587339 AQP12BA6NM10 295 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 C2orf74A8MZ97 194 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 NVLO15381 856 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 YY2O15391 372 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 IL3P08700 152 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 MAGP20916 626 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 PLA2G16P53816 162 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 OR4D2P58180 307 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 ZXDAP98168 799 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 LRRC74AQ0VAA2 488 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 PDE7AQ13946 482 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 ZIC1Q15915 447 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 FXNQ16595 210 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 TMEM26Q6ZUK4 368 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 TRIM73Q86UV7 250 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 GKN2Q86XP6 184 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 AQP12AQ8IXF9 295 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 MFSD9Q8NBP5 474 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 OR2T12Q8NG77 320 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 LMX1AQ8TE12 382 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 DNASE2BQ8WZ79 361 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 CCDC115Q96NT0 180 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 C17orf62Q9BQA9 187 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 KAT8Q9H7Z6 458 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 LHX9Q9NQ69 397 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 DLGAP2Q9P1A6 1054 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 BTNL2Q9UIR0 455 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 DOLKQ9UPQ8 538 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 PCDHB3Q9Y5E6 796 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 USP34Q70CQ2 3546 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 RNASET2O00584 256 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 CPSF4O95639 269 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 NCK1P16333 377 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 NXPH1P58417 271 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 RPS15AP62244 130 aaKnown RBP18.94■□□□□ 0.62
TRIM47-204ENST00000587339 ZNF385BQ569K4 471 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 TJAP1Q5JTD0 557 aa18.94■□□□□ 0.62
TRIM47-204ENST00000587339 OR4C11Q6IEV9 310 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms