RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 BRINP2Q9C0B6 783 aa14.24□□□□□ -0.13
NFIX-208ENST00000587260 TMEM45AQ9NWC5 275 aa14.24□□□□□ -0.13
NFIX-208ENST00000587260 SLC12A4Q9UP95 1085 aa14.24□□□□□ -0.13
NFIX-208ENST00000587260 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 LOC105369274A0A096LPK9 316 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 LOC102723532A0A0G2JNH3 316 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 CAPN14A8MX76 684 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 NDUFS4O43181 175 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 HYAL3O43820 417 aaPredicted RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 CSO75390 466 aaKnown RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 SEC22BO75396 215 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 SEMA3DO95025 777 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 KCNK5O95279 499 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 ETHE1O95571 254 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 MT-CO3P00414 261 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 EIF2S1P05198 315 aaKnown RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 IDO1P14902 403 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 FOLR1P15328 257 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 ARFIP1P53367 373 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 VSX2P58304 361 aaPredicted RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 SQLEQ14534 574 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 KRT72Q14CN4 511 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 ZSCAN26Q16670 478 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 ADPRMQ3LIE5 342 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 GALNTL6Q49A17 601 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 DEPDC1Q5TB30 811 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 CDCP2Q5VXM1 449 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 GALNT18Q6P9A2 607 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 OR4N4Q8N0Y3 316 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 D2HGDHQ8N465 521 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 DNAJC22Q8N4W6 341 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 N4BP2L2Q92802 583 aaPredicted RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 RERGQ96A58 199 aaPredicted RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 TM4SF19Q96DZ7 209 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 TMEM74Q96NL1 305 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 SDR39U1Q9NRG7 319 aaPredicted RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 STARD5Q9NSY2 213 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 AIG1Q9NVV5 245 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 NOP53Q9NZM5 478 aaKnown RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 GPR45Q9Y5Y3 372 aa14.23□□□□□ -0.13
NFIX-208ENST00000587260 COPG1Q9Y678 874 aaKnown RBP14.23□□□□□ -0.13
NFIX-208ENST00000587260 DCDC2BA2VCK2 349 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 TMEM150CB9EJG8 249 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 H0YGG7 62 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 P2RX6O15547 441 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 DKK1O94907 266 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 TGFB1P01137 390 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 CCKBRP32239 447 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 ARF3P61204 181 aaPredicted RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 TRA2AQ13595 282 aaKnown RBP eCLIP14.22□□□□□ -0.13
NFIX-208ENST00000587260 PWP1Q13610 501 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 TMEM35AQ53FP2 167 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 SPIN4Q56A73 249 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 TMTC4Q5T4D3 741 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 KHDRBS2Q5VWX1 349 aaKnown RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 DGLUCYQ7Z3D6 616 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 VN1R4Q7Z5H5 301 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 MCATQ8IVS2 390 aaKnown RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 METTL4Q8N3J2 472 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 APIPQ96GX9 242 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 CATSPER2Q96P56 530 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 CLCA2Q9UQC9 943 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 EIF3LQ9Y262 564 aaKnown RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 RUVBL1Q9Y265 456 aaKnown RBP14.22□□□□□ -0.13
NFIX-208ENST00000587260 KIF26BQ2KJY2 2108 aa14.22□□□□□ -0.13
NFIX-208ENST00000587260 LRIT2A6NDA9 550 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 EFCAB7A8K855 629 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 PRPS2P11908 318 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 MAPK1P28482 360 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 CSTF2P33240 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
NFIX-208ENST00000587260 GABRA4P48169 554 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 DIO3P55073 304 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 RPL38P63173 70 aaKnown RBP14.21□□□□□ -0.13
NFIX-208ENST00000587260 FOXM1Q08050 763 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 ACSM2AQ08AH3 577 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 HYAL2Q12891 473 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 KLF10Q13118 480 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 UBAP2LQ14157 1087 aaKnown RBP14.21□□□□□ -0.13
NFIX-208ENST00000587260 ISXQ2M1V0 245 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 HKDC1Q2TB90 917 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 PDCD4Q53EL6 469 aaKnown RBP14.21□□□□□ -0.13
NFIX-208ENST00000587260 MANEAQ5SRI9 462 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 IL23RQ5VWK5 629 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 ACSM2BQ68CK6 577 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 YTHDF3Q7Z739 585 aaKnown RBP14.21□□□□□ -0.13
NFIX-208ENST00000587260 ASPGQ86U10 573 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 CSNK1A1LQ8N752 337 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 NT5CQ8TCD5 201 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 RNF31Q96EP0 1072 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 DEPDC7Q96QD5 511 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 RTKNQ9BST9 563 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 OR51B5Q9H339 312 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 OCIAD1Q9NX40 245 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 AHSPQ9NZD4 102 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 ARMCX1Q9P291 453 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 PLCL2Q9UPR0 1127 aa14.21□□□□□ -0.13
NFIX-208ENST00000587260 CAPN7Q9Y6W3 813 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms