RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 ACMSDQ8TDX5 336 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 EPS8L3Q8TE67 593 aaKnown RBP17.74■□□□□ 0.43
ATG4D-203ENST00000585752 PPP4R1Q8TF05 950 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 C8orf44Q96CB5 159 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 SNRNP40Q96DI7 357 aaKnown RBP17.74■□□□□ 0.43
ATG4D-203ENST00000585752 ANKHQ9HCJ1 492 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 PRM3Q9NNZ6 103 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 CPSF2Q9P2I0 782 aaKnown RBP17.74■□□□□ 0.43
ATG4D-203ENST00000585752 MKL2Q9ULH7 1088 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 SHANK1Q9Y566 2161 aa17.74■□□□□ 0.43
ATG4D-203ENST00000585752 SETXQ7Z333 2677 aaKnown RBP17.74■□□□□ 0.43
ATG4D-203ENST00000585752 DOPEY2Q9Y3R5 2298 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 IGLV3-12A0A075B6K2 115 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 TCP11X1B4DZS4 312 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 H0YIG0 161 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 UBXN8O00124 270 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 CCNT2O60583 730 aaKnown RBP17.73■□□□□ 0.43
ATG4D-203ENST00000585752 SMIM24O75264 130 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 STK16O75716 305 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 SLC35G6P0C7Q6 338 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 ICAM2P13598 275 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 CCR8P51685 355 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 EEF1A2Q05639 463 aaKnown RBP17.73■□□□□ 0.43
ATG4D-203ENST00000585752 CDC16Q13042 620 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 LINC00696Q6ZRV3 163 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 Q6ZS92 163 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 LCA5Q86VQ0 697 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 MREGQ8N565 214 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 OR2W6PQ8NHA6 318 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 SLC5A11Q8WWX8 675 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 CAPS2Q9BXY5 557 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 RIC8BQ9NVN3 520 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 TMCO1Q9UM00 188 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 SLC22A14Q9Y267 594 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 ANGPTL3Q9Y5C1 460 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 NBASA2RRP1 2371 aa17.73■□□□□ 0.43
ATG4D-203ENST00000585752 FLNBO75369 2602 aaKnown RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 DYTNA2CJ06 578 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 BLACEA4D250 179 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 GOLGA8RI6L899 631 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 CLGNO14967 610 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 STATHP02808 62 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 NPPBP16860 134 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 HSPA7P48741 367 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 SKP1P63208 163 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ARG2P78540 354 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 EIF2S3LQ2VIR3 472 aaKnown RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ATG9BQ674R7 924 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 TMPRSS11BQ86T26 416 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ASPGQ86U10 573 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 LAPTM4BQ86VI4 370 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 PLD6Q8N2A8 252 aaKnown RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 SLC13A3Q8WWT9 602 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 C19orf60Q96EN9 201 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 LMF1Q96S06 567 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ATOH8Q96SQ7 321 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ROPN1BQ9BZX4 212 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 TGIF2Q9GZN2 237 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ROPN1Q9HAT0 212 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ZBTB20Q9HC78 741 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 DNAJC11Q9NVH1 559 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 ASF1BQ9NVP2 202 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 C19orf25Q9UFG5 118 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-203ENST00000585752 SCN2AQ99250 2005 aa17.72■□□□□ 0.43
ATG4D-203ENST00000585752 KCNE1BA0A087WTH5 132 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 FEZF1A0PJY2 475 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 P2RX6O15547 441 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 FOXS1O43638 330 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 H2AFYO75367 372 aaKnown RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 NSA2O95478 260 aaKnown RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 C8orf89P0DMQ9 161 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 PYGBP11216 843 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 GNAZP19086 355 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 TAC1P20366 129 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 GDF5P43026 501 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 CSNK1G2P78368 415 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 MFAP5Q13361 173 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 ZNF169Q14929 603 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 RASA2Q15283 850 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 TLR1Q15399 786 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 NR6A1Q15406 480 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 PFKFB4Q16877 469 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 SYT16Q17RD7 645 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 MINDY4Q4G0A6 757 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 TECRLQ5HYJ1 363 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 CRB2Q5IJ48 1285 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 LRRC70Q7Z2Q7 622 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 OR9A4Q8NGU2 314 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 ZCCHC10Q8TBK6 192 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 MRPL57Q9BQC6 102 aaKnown RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 AIF1LQ9BQI0 150 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 MRPL46Q9H2W6 279 aaKnown RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 PTGFRNQ9P2B2 879 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 XPR1Q9UBH6 696 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 OPTCQ9UBM4 332 aa17.71■□□□□ 0.43
ATG4D-203ENST00000585752 PTBP2Q9UKA9 531 aaKnown RBP17.71■□□□□ 0.43
ATG4D-203ENST00000585752 CLEC18AA5D8T8 446 aa17.7■□□□□ 0.42
ATG4D-203ENST00000585752 SERPIND1P05546 499 aa17.7■□□□□ 0.42
ATG4D-203ENST00000585752 GSTA1P08263 222 aa17.7■□□□□ 0.42
ATG4D-203ENST00000585752 GP1BBP13224 206 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms