RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 TTPAP49638 278 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TPM4P67936 248 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 BTG2P78543 158 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 ABATP80404 500 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TAP2Q03519 686 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 KCNJ11Q14654 390 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 POU4F3Q15319 338 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 KLHL38Q2WGJ6 581 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 P3H1Q32P28 736 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 PCGF5Q86SE9 256 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 SLC26A11Q86WA9 606 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 CREB3L4Q8TEY5 395 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 ERVK-11Q9UQG0 969 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 TCAF1Q9Y4C2 921 aa13.17□□□□□ -0.3
CSNK1D-224ENST00000584672 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 FAM171A2A8MVW0 826 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 ACOT7O00154 380 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 BCKDKO14874 412 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 PSMD3O43242 534 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 PSIP1O75475 530 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 CATP04040 527 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 CELA3AP09093 270 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 MAOAP21397 527 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 ADRA1DP25100 572 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 MAGEA5P43359 124 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 COPS2P61201 443 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 RPS15AP62244 130 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 MPP1Q00013 466 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 RELAQ04206 551 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 ARHGAP19Q14CB8 494 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 RELL2Q8NC24 303 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 PSD4Q8NDX1 1056 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 OR2M7Q8NG81 312 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 FAM222BQ8WU58 562 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 TBC1D20Q96BZ9 403 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 OR1F2PQ96R84 312 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 EBNA1BP2Q99848 306 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 TTTY12Q9BZ98 90 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 ZDHHC11Q9H8X9 412 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 LIN28AQ9H9Z2 209 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 SH2B3Q9UQQ2 575 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 ZANQ9Y493 2812 aa13.16□□□□□ -0.3
CSNK1D-224ENST00000584672 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 CHST10O43529 356 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 KIF5CO60282 957 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 CD53P19397 219 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 BMP5P22003 454 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 PPP2R2BQ00005 443 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 GBX1Q14549 363 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 Q5PR19 223 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 ASPGQ86U10 573 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 CAMKVQ8NCB2 501 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 NFAM1Q8NET5 270 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 RHBGQ9H310 441 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 ABHD10Q9NUJ1 306 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 TMEM184CQ9NVA4 438 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
CSNK1D-224ENST00000584672 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 ZNF839A8K0R7 811 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 GOLGA8KD6RF30 607 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 GOLGA8TH3BQL2 631 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 SYT5O00445 386 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 LCMT2O60294 686 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 TJP3O95049 919 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 PTMAP06454 111 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 CHRM3P20309 590 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 RPS3P23396 243 aaKnown RBP eCLIP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 JAK1P23458 1154 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 CTNNA1P35221 906 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 SSR4P51571 173 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 WNT3P56703 355 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 CRADDP78560 199 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 DEFB134Q4QY38 66 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 IL20RBQ6UXL0 311 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 TRILQ7L0X0 811 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 SLC22A16Q86VW1 577 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 TMEM251Q8N6I4 163 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 LINC01560Q8TB33 94 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 SLC13A3Q8WWT9 602 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 KIAA1191Q96A73 305 aa13.14□□□□□ -0.31
CSNK1D-224ENST00000584672 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms