RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CYS1Q717R9 158 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 ABHD13Q7L211 337 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 Q8N402 240 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 OR52E4Q8NGH9 312 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 CNIH3Q8TBE1 160 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 KCNJ9Q92806 393 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 YIPF4Q9BSR8 244 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 GKN3PP0CG01 181 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 CCKBRP32239 447 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 RFC2P35250 354 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 KCNC3Q14003 757 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
RNF43-208ENST00000584437 METTL25Q8N6Q8 603 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 WFIKKN2Q8TEU8 576 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 POLE4Q9NR33 117 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 MT-ND2P03891 347 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 MYF6P23409 242 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 FADDQ13158 208 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 CHRNA6Q15825 494 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 ASRGL1Q7L266 308 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 PQLC3Q8N755 202 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 GRHL3Q8TE85 626 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 PMM1Q92871 262 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
RNF43-208ENST00000584437 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
RNF43-208ENST00000584437 TRBV23OR9-2A0A075B6M9 112 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 CH25HO95992 272 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 ATP1B2P14415 290 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 CARM1Q86X55 608 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 ARL14EPQ8N8R7 260 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 CCDC120Q96HB5 630 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MAELQ96JY0 434 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 TEX13DA0A0J9YY54 714 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 TMEM150CB9EJG8 249 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 FAAHO00519 579 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MAP2K4P45985 399 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 NFATC3Q12968 1075 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 LRRC32Q14392 662 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 PLD6Q8N2A8 252 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 SMPDL3AQ92484 453 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 DPF3Q92784 378 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 KCNN1Q92952 543 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 HYLS1Q96M11 299 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 TRMT61BQ9BVS5 477 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 HCN3Q9P1Z3 774 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 UTS2RQ9UKP6 389 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 SCGB1D2O95969 90 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 OAS1P00973 400 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 CSKP41240 450 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MLLT6P55198 1093 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 AIMP2Q13155 320 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 CLCA4Q14CN2 919 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 ADGRF1Q5T601 910 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 KIF18BQ86Y91 864 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 KCNA7Q96RP8 456 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MGLLQ99685 303 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 TTYH2Q9BSA4 534 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 EPOP01588 193 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 DCKP27707 260 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 FKBP1BP68106 108 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 RPP38P78345 283 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 GINS1Q14691 196 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 PTCHD3Q3KNS1 767 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 RHEBL1Q8TAI7 183 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 SGCDQ92629 289 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 NUS1Q96E22 293 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 RPL10LQ96L21 214 aaKnown RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 SMOC2Q9H3U7 446 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 MYNNQ9NPC7 610 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 SERINC1Q9NRX5 453 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 WRAP73Q9P2S5 460 aaPredicted RBP12.63□□□□□ -0.39
RNF43-208ENST00000584437 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
RNF43-208ENST00000584437 A0A0J9YVX5 310 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms