RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TRPV3Q8NET8 790 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 TMEM79Q9BSE2 394 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 SLC6A16Q9GZN6 736 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 KLHL31Q9H511 634 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 ZDHHC18Q9NUE0 388 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 PLA2G3Q9NZ20 509 aa20.23■□□□□ 0.83
PPP4R1-228ENST00000584074 DOCK10Q96BY6 2186 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 SHANK1Q9Y566 2161 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 USP9XQ93008 2570 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 CHST10O43529 356 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 C1GALT1C1LP0DN25 315 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 ICAM2P13598 275 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 RHAGQ02094 409 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 CDC16Q13042 620 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 TLR1Q15399 786 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 ABHD13Q7L211 337 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 CMC1Q7Z7K0 106 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 CREB3L4Q8TEY5 395 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 ESAMQ96AP7 390 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 OR1F2PQ96R84 312 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 BARD1Q99728 777 aaKnown RBP20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 WWOXQ9NZC7 414 aa20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 C19orf25Q9UFG5 118 aaPredicted RBP20.22■□□□□ 0.83
PPP4R1-228ENST00000584074 PTPN13Q12923 2485 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 C4orf51C9J302 202 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 H2AFYO75367 372 aaKnown RBP20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 CBX6O95503 412 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 F10P00742 488 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 UQCRHP07919 91 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 FHP07954 510 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 IL10P22301 178 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 GGT5P36269 586 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 TSFMP43897 325 aaKnown RBP20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 KCNC1P48547 511 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 SKP1P63208 163 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 ARG2P78540 354 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 SLBPQ14493 270 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 SLMAPQ14BN4 828 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 ABRAXAS2Q15018 415 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 NSDHLQ15738 373 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 FHL5Q5TD97 284 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 TCAIMQ8N3R3 496 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 TSLPQ969D9 159 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 TBC1D20Q96BZ9 403 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 AICDAQ9GZX7 198 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 CD274Q9NZQ7 290 aa20.21■□□□□ 0.83
PPP4R1-228ENST00000584074 DYTNA2CJ06 578 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SEMA7AO75326 666 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SERPINA6P08185 405 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SLC35E2BP0CK96 405 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SMIM10L1P0DMW3 83 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 HSPA7P48741 367 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 AGTR2P50052 363 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 DLG1Q12959 904 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 BTBD16Q32M84 506 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 TOR1AIP1Q5JTV8 583 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 CDKL4Q5MAI5 379 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 PLAG1Q6DJT9 500 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SULT1C3Q6IMI6 304 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 TMIGD1Q6UXZ0 262 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 RAPH1Q70E73 1250 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 PLPP5Q8NEB5 264 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 OR1N1Q8NGS0 311 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 ZNF592Q92610 1267 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 EXT2Q93063 718 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 KIAA1191Q96A73 305 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 MRRFQ96E11 262 aaKnown RBP20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SMIM10Q96HG1 83 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 ALG9Q9H6U8 611 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 CNOT10Q9H9A5 744 aaKnown RBP20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 DNAJC11Q9NVH1 559 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 RNF112Q9ULX5 631 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 SCN3AQ9NY46 2000 aa20.2■□□□□ 0.82
PPP4R1-228ENST00000584074 URADA6NGE7 173 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 CYSRT1A8MQ03 144 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 A8MUI8 341 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 MAGEB17A8MXT2 336 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 PRAMEF4O60810 478 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 B4GALT2O60909 372 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 AGFG2O95081 481 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 TNFSF10P50591 281 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 AP2B1P63010 937 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 NAB1Q13506 487 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 SFT2D3Q587I9 215 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 PRAMEF9Q5VWM5 478 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 NIPAL1Q6NVV3 410 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 SNX31Q8N9S9 440 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 PDPRQ8NCN5 879 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 PRR7Q8TB68 274 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 GRHL3Q8TE85 626 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 HAS2Q92819 552 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 CAPS2Q9BXY5 557 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 GPRC5BQ9NZH0 403 aa20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 PTBP2Q9UKA9 531 aaKnown RBP20.19■□□□□ 0.82
PPP4R1-228ENST00000584074 BLACEA4D250 179 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 STK16O75716 305 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 WDPCPO95876 746 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 TFEBP19484 476 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms