RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TUBB8Q3ZCM7 444 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 MINDY4Q4G0A6 757 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 DCAF10Q5QP82 559 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 PRAMEF9Q5VWM5 478 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 HIST2H2AA3Q6FI13 130 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 TCTN3Q6NUS6 607 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 KIRREL2Q6UWL6 708 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 AFAP1L2Q8N4X5 818 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 UTP15Q8TED0 518 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 CREB3L4Q8TEY5 395 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 C8orf44Q96CB5 159 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 RBCK1Q9BYM8 510 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 TGIF2Q9GZN2 237 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 KLHL31Q9H511 634 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 NT5DC2Q9H857 520 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 GPR83Q9NYM4 423 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 FETUBQ9UGM5 382 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 TBK1Q9UHD2 729 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 V9GYY5 206 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 BOD1L1Q8NFC6 3051 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 LRRC14BA6NHZ5 514 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 SMIM23A6NLE4 172 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 GALR3O60755 368 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 SMIM24O75264 130 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 JRKO75564 520 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 BMP10O95393 424 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 CD22P20273 847 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 GSTM2P28161 218 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 STXBP1P61764 594 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 VSNL1P62760 191 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 OLR1P78380 273 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 EEF1A2Q05639 463 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 HYAL2Q12891 473 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 TBCCQ15814 346 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 NIPAL1Q6NVV3 410 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 ASB18Q6ZVZ8 466 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF605Q86T29 641 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 MYLK4Q86YV6 388 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PTGR2Q8N8N7 351 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 FDCSPQ8NFU4 85 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 OR11G2Q8NGC1 345 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 OR5T3Q8NGG3 340 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 WDR34Q96EX3 536 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PEX11GQ96HA9 241 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 MESP1Q9BRJ9 268 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PITHD1Q9GZP4 211 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 COPG2Q9UBF2 871 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 TMCO1Q9UM00 188 aa11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 TNPO3Q9Y5L0 923 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-218ENST00000582955 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 A0A0G2JN53 185 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ERI3O43414 337 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 KLK8O60259 260 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 CLEC3AO75596 197 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 CEACAM4O75871 244 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 SIX3O95343 332 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 PDGFAP04085 211 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 SHBGP04278 402 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 PCNAP12004 261 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ITGA3P26006 1051 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 HPDP32754 393 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ARL1P40616 181 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 PIK3CGP48736 1102 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 GTF2H2Q13888 395 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 PCBP2Q15366 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 GTF2H2CQ6P1K8 395 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 MED27Q6P2C8 311 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 TEX19Q8NA77 164 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 METTL21AQ8WXB1 218 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 UBE2E3Q969T4 207 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 FAR2Q96K12 515 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 MRPL57Q9BQC6 102 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 NUDT9Q9BW91 350 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 VN1R1Q9GZP7 353 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 MRPL46Q9H2W6 279 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ACTR8Q9H981 624 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF160Q9HCG1 818 aa11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF490Q9ULM2 529 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-218ENST00000582955 BSNQ9UPA5 3926 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms