RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 RGS6P49758 472 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 EPHB3P54753 998 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 GANABQ14697 944 aaKnown RBP13.17□□□□□ -0.3
RNF43-205ENST00000581868 ZNF385BQ569K4 471 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 ZNF362Q5T0B9 420 aaPredicted RBP13.17□□□□□ -0.3
RNF43-205ENST00000581868 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 NLGN4XQ8N0W4 816 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 KBTBD8Q8NFY9 601 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 COL21A1Q96P44 957 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
RNF43-205ENST00000581868 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
RNF43-205ENST00000581868 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 PCDH17O14917 1159 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 DPM1O60762 260 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 ANXA8P13928 327 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 GJA1P17302 382 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 ASMTP46597 345 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 RPS13P62277 151 aaKnown RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 HBA1P69905 142 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MED22Q15528 200 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 TEAD4Q15561 434 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 C10orf62Q5T681 223 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 PNCKQ6P2M8 343 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 TUBA3EQ6PEY2 450 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 OR7G3Q8NG95 312 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 OR5AK3PQ8NH89 298 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MAGEB10Q96LZ2 347 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 CORO1BQ9BR76 489 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 STOX2Q9P2F5 926 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MAP4K5Q9Y4K4 846 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 PSMD11O00231 422 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 UGDHO60701 494 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 C6orf47O95873 294 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 GABRR2P28476 465 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MC1RQ01726 317 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SCARB2Q14108 478 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 MICAQ29983 383 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SYTL3Q4VX76 610 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 TPGS2Q68CL5 300 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 Q6ZVL8 140 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 Q6ZVU0 165 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 OTOP2Q7RTS6 562 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 Q8N9G6 341 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 MCCC1Q96RQ3 725 aaPredicted RBP13.16□□□□□ -0.3
RNF43-205ENST00000581868 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SLC35A5Q9BS91 424 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 FKBP14Q9NWM8 211 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 RHCGQ9UBD6 479 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 IFT52Q9Y366 437 aa13.16□□□□□ -0.3
RNF43-205ENST00000581868 H0YIV9 168 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 ASNA1O43681 348 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 AOC2O75106 756 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 MED26O95402 600 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 SLC16A8O95907 504 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 POU1F1P28069 291 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 NR4A2P43354 598 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 IER5LQ5T953 404 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 GRHL2Q6ISB3 625 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 CYP4Z2PQ8N1L4 340 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 CIDECQ96AQ7 238 aaPredicted RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 OR5M11Q96RB7 305 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 FAM83DQ9H4H8 585 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 ZNF282Q9UDV7 671 aaPredicted RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 EXO1Q9UQ84 846 aaKnown RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 PCDHGA3Q9Y5H0 932 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 INSL5Q9Y5Q6 135 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 ZNF106Q9H2Y7 1883 aaKnown RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 KPNA5O15131 536 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms