RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MRPL17Q9NRX2 175 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 EXOC1Q9NV70 894 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 FBXL4Q9UKA2 621 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 PPP1R3CQ9UQK1 317 aa4.07□□□□□ -1.76
SMCHD1-205ENST00000581383 PFASO15067 1338 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 NPHP3Q7Z494 1330 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 A0A087X002 238 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 NR5A2O00482 541 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 EDIL3O43854 480 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 CLDN1O95832 211 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 IGLV1-44P01699 117 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 VDRP11473 427 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF26P17031 533 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 VCLP18206 1134 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 SRD5A2P31213 254 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 OR3A3P47888 321 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ADARP55265 1226 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 OR1D5P58170 312 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 FKBP1BP68106 108 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ARHGAP1Q07960 439 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 PPP2R5CQ13362 524 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ARMCX4Q5H9R4 360 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 SIGLEC15Q6ZMC9 328 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ZC3H3Q8IXZ2 948 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 OR6S1Q8NH40 331 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 MAPK15Q8TD08 544 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNRF4Q8WWF5 429 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 RFT1Q96AA3 541 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 RASL10BQ96S79 203 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 TDRD1Q9BXT4 1180 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 BARHL1Q9BZE3 327 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 RNPEPL1Q9HAU8 725 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 GPR173Q9NS66 373 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 SPG21Q9NZD8 308 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 TRPC4Q9UBN4 977 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 POLKQ9UBT6 870 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 STX8Q9UNK0 236 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 TMED7Q9Y3B3 224 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 SELENOKQ9Y6D0 94 aa4.06□□□□□ -1.76
SMCHD1-205ENST00000581383 MYH15Q9Y2K3 1946 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 GLTPD2A6NH11 291 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 MLNRO43193 412 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SCO2O43819 266 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF821O75541 412 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 AKAP3O75969 853 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 HMOX1P09601 288 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SBK2P0C263 348 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 AADACP22760 399 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 OPRL1P41146 370 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC6A12P48065 614 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 KHKP50053 298 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SERPINH1P50454 418 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 RPP38P78345 283 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 TRA2AQ13595 282 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 PPA1Q15181 289 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 FUT11Q495W5 492 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SPC24Q8NBT2 197 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 OR2T6Q8NHC8 308 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 SNX21Q969T3 373 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 CCDC43Q96MW1 224 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 RBM4Q9BWF3 364 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 DGCR6LQ9BY27 220 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 OSBPL8Q9BZF1 889 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 ACPTQ9BZG2 426 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 EGLN1Q9GZT9 426 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 CACNG5Q9UF02 275 aa4.05□□□□□ -1.76
SMCHD1-205ENST00000581383 IGKV3D-15A0A087WSY6 115 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 A0A087WZ39 114 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 A0A087X0K7 114 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 MAGEB16A2A368 324 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TRIM64A6NGJ6 449 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TRIM64BA6NI03 449 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF732B4DXR9 585 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC1A7O00341 560 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 MAGEB2O15479 319 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 KINO60870 393 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 RTN2O75298 545 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 HNF4AP41235 474 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 KIAA1024LP59773 190 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 BTG1P62324 171 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 PMP22Q01453 160 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 GUCY2DQ02846 1103 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC34A1Q06495 639 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ACTN3Q08043 901 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TEFQ10587 303 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 MTF1Q14872 753 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TAB1Q15750 504 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SGCBQ16585 318 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 HLA-BQ31612 363 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ZFP69Q49AA0 526 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 LRRC37A5PQ49AS3 106 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 IFI44LQ53G44 452 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC10A5Q5PT55 438 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ATP1A1-AS1Q5TC04 95 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 AGAP6Q5VW22 663 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 PRAMEF8Q5VWM4 474 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms