RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SMIM10L1P0DMW3 83 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 GNGT1P63211 74 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 HMGCS1Q01581 520 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 FAM214AQ32MH5 1076 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 TMEM35AQ53FP2 167 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 XKR7Q5GH72 579 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 DCAF12Q5T6F0 453 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 PRAMEF17Q5VTA0 474 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 YOD1Q5VVQ6 348 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 PWWP2BQ6NUJ5 590 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 FOXR1Q6PIV2 292 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 CEACAM20Q6UY09 585 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 Q6ZSR9 355 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 CHSY3Q70JA7 882 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 DDIASQ8IXT1 998 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 LRRC34Q8IZ02 419 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 OR2L5Q8NG80 312 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 OR2T11Q8NH01 316 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 UTP15Q8TED0 518 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 C19orf60Q96EN9 201 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 SMIM10Q96HG1 83 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 C10orf90Q96M02 699 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 C3orf30Q96M34 536 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 TAAR9Q96RI9 348 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 DDA1Q9BW61 102 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 NUF2Q9BZD4 464 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 PFDN4Q9NQP4 134 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 FGFR1OP2Q9NVK5 253 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 VPS29Q9UBQ0 182 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC12A4Q9UP95 1085 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 MRPS2Q9Y399 296 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 USH1CQ9Y6N9 552 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
CSNK1D-212ENST00000580061 C4orf51C9J302 202 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 NPIPB8E9PQR5 432 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 SAP18O00422 153 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 RGS14O43566 566 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 SEMA3DO95025 777 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 TGDSO95455 350 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ALOX15P16050 662 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 PRPH2P23942 346 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ARSFP54793 590 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 SNRPNP63162 240 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 FOXC1Q12948 553 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 NDUFA9Q16795 377 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 IMPG1Q17R60 797 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ABHD17CQ6PCB6 329 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 MAVSQ7Z434 540 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 MTERF4Q7Z6M4 381 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 TMEM126BQ8IUX1 230 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ZCCHC10Q8TBK6 192 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 GAL3ST3Q96A11 431 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 CHMP6Q96FZ7 201 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 TEFMQ96QE5 360 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ZPBPQ9BS86 351 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 NDC1Q9BTX1 674 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ASPSCR1Q9BZE9 553 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 POLR1BQ9H9Y6 1135 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 CUTCQ9NTM9 273 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 NMRK1Q9NWW6 199 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 PCDHB3Q9Y5E6 796 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 PCDHGA3Q9Y5H0 932 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 B3GALT1Q9Y5Z6 326 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC22A7Q9Y694 548 aa15.12■□□□□ 0.01
CSNK1D-212ENST00000580061 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ATP6AP2A0A1C7CYW4 349 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 C9orf172C9J069 976 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 PLPP1O14494 284 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ERI3O43414 337 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ATP6AP2O75787 350 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 RSL1D1O76021 490 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 TNFSF15O95150 251 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ZNF888P0CJ79 500 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ALOX12P18054 663 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ARFIP1P53367 373 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 RAB8AP61006 207 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 GABREP78334 506 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 TBL3Q12788 808 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 CAMK2BQ13554 666 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 COL9A2Q14055 689 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 FAM53BQ14153 422 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 MUM1Q2TAK8 710 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 TUBB8Q3ZCM7 444 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 TRIM40Q6P9F5 258 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ABHD13Q7L211 337 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 UBE3DQ7Z6J8 389 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 SRFBP1Q8NEF9 429 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 RGMAQ96B86 450 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 PPP1R36Q96LQ0 422 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 CENPKQ9BS16 269 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 MRPL1Q9BYD6 325 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 ACTR5Q9H9F9 607 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 MEAF6Q9HAF1 191 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 SRPK3Q9UPE1 567 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 WASF3Q9UPY6 502 aa15.11■□□□□ 0.01
CSNK1D-212ENST00000580061 GMNCA6NCL1 334 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TRPC5OSA6NMA1 111 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 RTCAO00442 366 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms