RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NBASA2RRP1 2371 aa6.21□□□□□ -1.42
TRAF4-213ENST00000578917 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 IQANK1A0A1B0GTG1 560 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 OR2W5A6NFC9 320 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PYCARD-AS1I3L0S3 204 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 K7EM74 188 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 K7EPI3 171 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 MASP2O00187 686 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SOCS6O14544 535 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PCDH17O14917 1159 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 RIPK2O43353 540 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ERI3O43414 337 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CHST10O43529 356 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PRMT3O60678 531 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 GALR3O60755 368 aaPredicted RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ALOX12BO75342 701 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 JRKO75564 520 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 BMP10O95393 424 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 HPP00738 406 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ALDOAP04075 364 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SERPINA6P08185 405 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 FAM153BP0C7A2 387 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 COL6A2P12110 1019 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 RNH1P13489 461 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PLA2G2AP14555 144 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 JAK1P23458 1154 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ECHS1P30084 290 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CASRP41180 1078 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SLC6A12P48065 614 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PIK3CGP48736 1102 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 AGTR2P50052 363 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PLA2G16P53816 162 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ALDH18A1P54886 795 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 AP2B1P63010 937 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 OLR1P78380 273 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 REEP5Q00765 189 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 KCNC4Q03721 635 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TLE1Q04724 770 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 EEF1A2Q05639 463 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 DLG1Q12959 904 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 DDX39BQ13838 428 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 RCN2Q14257 317 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SLC29A2Q14542 456 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ABRAXAS2Q15018 415 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TSNAXIP1Q2TAA8 658 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 FAM153CQ494X1 144 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 UBAP2Q5T6F2 1119 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 VWA5B1Q5TIE3 1220 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TTC19Q6DKK2 380 aaPredicted RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 MED27Q6P2C8 311 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TRIM40Q6P9F5 258 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 LINC00696Q6ZRV3 163 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CHSY3Q70JA7 882 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 HPS6Q86YV9 775 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM151BQ8IW70 566 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CENPLQ8N0S6 344 aaPredicted RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ANKRD53Q8N9V6 530 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PDPRQ8NCN5 879 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ARMC2Q8NEN0 867 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 OR5T3Q8NGG3 340 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 RHEBL1Q8TAI7 183 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 DNAJB14Q8TBM8 379 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 NT5CQ8TCD5 201 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PPP4R1Q8TF05 950 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TBC1D20Q96BZ9 403 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 MTBPQ96DY7 904 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PHF21BQ96EK2 531 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PTCHD1Q96NR3 888 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 CENPKQ9BS16 269 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SARGQ9BW04 601 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 NUDT9Q9BW91 350 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 RBCK1Q9BYM8 510 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TRIM4Q9C037 500 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TGIF2Q9GZN2 237 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 LHPPQ9H008 270 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ILKAPQ9H0C8 392 aaPredicted RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SPNS1Q9H2V7 528 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 EHD1Q9H4M9 534 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 IPPKQ9H8X2 491 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 SYNPO2LQ9H987 977 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 COPS7BQ9H9Q2 264 aaPredicted RBP6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TBK1Q9UHD2 729 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TEKT2Q9UIF3 430 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF180Q9UJW8 692 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 TMCO1Q9UM00 188 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 PCDHGB7Q9Y5F8 929 aa6.2□□□□□ -1.42
TRAF4-213ENST00000578917 IGLV3-12A0A075B6K2 115 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 IGHV3-20A0A0C4DH32 117 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 A0A0G2JN53 185 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 HMX2A2RU54 273 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 LRIT2A6NDA9 550 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SMIM23A6NLE4 172 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CLDN4O14493 209 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 B3GALT2O43825 422 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SH3BGRLO75368 114 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CLEC3AO75596 197 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CEACAM4O75871 244 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SEC24DO94855 1032 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms