RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 COPS7BQ9H9Q2 264 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ANKHQ9HCJ1 492 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DMRT3Q9NQL9 472 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RIC8BQ9NVN3 520 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF225Q9UK10 706 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RUVBL1Q9Y265 456 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FER1L5A0AVI2 2057 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SDK2Q58EX2 2172 aa10.75□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CCDC88CQ9P219 2028 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LOC105369274A0A096LPK9 316 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LOC102723532A0A0G2JNH3 316 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SERTM1A2A2V5 107 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TRPC5OSA6NMA1 111 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF749O43361 778 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ITM2AO43736 263 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NRP2O60462 931 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SEMA3DO95025 777 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TNFSF15O95150 251 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PDYNP01213 254 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KLK3P07288 261 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ITIH1P19827 911 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TSFMP43897 325 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RPS13P62277 151 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 OCRLQ01968 901 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CUL3Q13618 768 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FAM53BQ14153 422 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HKDC1Q2TB90 917 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SGO1Q5FBB7 561 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TOR1AIP1Q5JTV8 583 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KHDRBS2Q5VWX1 349 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PRMT9Q6P2P2 845 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MTERF4Q7Z6M4 381 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 OR4N4Q8N0Y3 316 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF781Q8N8C0 355 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PROKR1Q8TCW9 393 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CREB3L4Q8TEY5 395 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TWIST2Q8WVJ9 160 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 USP7Q93009 1102 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RGMAQ96B86 450 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MTFMTQ96DP5 389 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KCNA7Q96RP8 456 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MTERF1Q99551 399 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CTRCQ99895 268 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C17orf62Q9BQA9 187 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DPH2Q9BQC3 489 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SIKE1Q9BRV8 207 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MS4A8Q9BY19 250 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ULBP3Q9BZM4 244 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SLC6A16Q9GZN6 736 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 REXO4Q9GZR2 422 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SPRTNQ9H040 489 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 THSD1Q9NS62 852 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NDOR1Q9UHB4 597 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZDHHC2Q9UIJ5 367 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HAO1Q9UJM8 370 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TIMM22Q9Y584 194 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SLC22A7Q9Y694 548 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 AK5Q9Y6K8 562 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ARHGAP10A1A4S6 786 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LRIT2A6NDA9 550 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MAGEB17A8MXT2 336 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DSCR3O14972 297 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 VPS4BO75351 444 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MYO1DO94832 1006 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TGFB1P01137 390 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CCNYL3P0C7X3 344 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 AGXTP21549 392 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ALAS2P22557 587 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SERPINB3P29508 390 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FOXA1P55317 472 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GUCY1A3Q02108 690 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 AP5B1Q2VPB7 878 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PRTGQ2VWP7 1150 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ADPRMQ3LIE5 342 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SPIN4Q56A73 249 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SPDYAQ5MJ70 313 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DEPDC1Q5TB30 811 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CLEC6AQ6EIG7 209 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PWWP2BQ6NUJ5 590 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TMEM214Q6NUQ4 689 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TTLL10Q6ZVT0 673 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 OR2L5Q8NG80 312 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZCCHC10Q8TBK6 192 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 METTL2AQ96IZ6 378 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LRFN5Q96NI6 719 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 QRFPRQ96P65 431 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KCNC2Q96PR1 638 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SORT1Q99523 831 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TBCDQ9BTW9 1192 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CLK4Q9HAZ1 481 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 APMAPQ9HDC9 416 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 STARD5Q9NSY2 213 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms