RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ILF2Q12905 390 aaKnown RBP14.95□□□□□ -0.02
CRLF3-203ENST00000578692 CALCOCO2Q13137 446 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 ACER2Q5QJU3 275 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 PAPD4Q6PIY7 484 aaKnown RBP14.95□□□□□ -0.02
CRLF3-203ENST00000578692 FRA10AC1Q70Z53 315 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 TMPRSS11BQ86T26 416 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 ANKRD53Q8N9V6 530 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 UTP15Q8TED0 518 aaKnown RBP14.95□□□□□ -0.02
CRLF3-203ENST00000578692 LPAR4Q99677 370 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 ERP44Q9BS26 406 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 MCMBPQ9BTE3 642 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 DPH5Q9H2P9 285 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 CLK4Q9HAZ1 481 aaKnown RBP14.95□□□□□ -0.02
CRLF3-203ENST00000578692 POPDC3Q9HBV1 291 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 SMYD2Q9NRG4 433 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 WHRNQ9P202 907 aa14.95□□□□□ -0.02
CRLF3-203ENST00000578692 CTAGE15A4D2H0 777 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 FAM187AA6NFU0 413 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 PRAMEF2O60811 474 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SMIM10L1P0DMW3 83 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 JAK1P23458 1154 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 COL8A1P27658 744 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SSTR1P30872 391 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 HNF4AP41235 474 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 OR4D2P58180 307 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 POU4F1Q01851 419 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 TSNQ15631 228 aaKnown RBP14.94□□□□□ -0.02
CRLF3-203ENST00000578692 MEP1AQ16819 746 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 FCRLBQ6BAA4 426 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 ADAMTSL2Q86TH1 951 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 CTAGE6Q86UF2 777 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SPATA4Q8NEY3 305 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 DNAJB8Q8NHS0 232 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 NR4A3Q92570 626 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 TSLPQ969D9 159 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SMIM10Q96HG1 83 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SLC6A16Q9GZN6 736 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 KLHL31Q9H511 634 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 MMP25Q9NPA2 562 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 SAYSD1Q9NPB0 183 aa14.94□□□□□ -0.02
CRLF3-203ENST00000578692 MTO1Q9Y2Z2 717 aaKnown RBP14.94□□□□□ -0.02
CRLF3-203ENST00000578692 UTP20O75691 2785 aaKnown RBP14.94□□□□□ -0.02
CRLF3-203ENST00000578692 EIF3HO15372 352 aaKnown RBP eCLIP14.93□□□□□ -0.02
CRLF3-203ENST00000578692 B4GALT2O60909 372 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 H2AFYO75367 372 aaKnown RBP14.93□□□□□ -0.02
CRLF3-203ENST00000578692 WDR47O94967 919 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 CRYABP02511 175 aaKnown RBP14.93□□□□□ -0.02
CRLF3-203ENST00000578692 STSP08842 583 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 C1GALT1C1LP0DN25 315 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 GNAZP19086 355 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 GDF5P43026 501 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 TDGF1P3P51864 188 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 PER3P56645 1201 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 RAB8AP61006 207 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 HYAL2Q12891 473 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 USP10Q14694 798 aaKnown RBP14.93□□□□□ -0.02
CRLF3-203ENST00000578692 C18orf21Q32NC0 220 aaPredicted RBP14.93□□□□□ -0.02
CRLF3-203ENST00000578692 CRLF3Q8IUI8 442 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 CREB3L4Q8TEY5 395 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 CDKL2Q92772 493 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 RHBDF1Q96CC6 855 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 PTCHD1Q96NR3 888 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 DERL2Q9GZP9 239 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 ABI3Q9P2A4 366 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 TXNDC16Q9P2K2 825 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 ZGRF1Q86YA3 2104 aa14.93□□□□□ -0.02
CRLF3-203ENST00000578692 A0A1B0GUH1 482 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 NCF1BA6NI72 391 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-203ENST00000578692 NCF1CA8MVU1 366 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-203ENST00000578692 CXorf49A8MYA2 514 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-203ENST00000578692 RAD51CO43502 376 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 PRMT3O60678 531 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 SERPINA6P08185 405 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 NCF1P14598 390 aaPredicted RBP14.92□□□□□ -0.02
CRLF3-203ENST00000578692 SLC6A12P48065 614 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 SLC26A5P58743 744 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 BTG2P78543 158 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 TGFBIQ15582 683 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 ZNF766Q5HY98 468 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 C3orf62Q6ZUJ4 267 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 CYS1Q717R9 158 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 KLHDC8AQ8IYD2 350 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 TSPAN17Q96FV3 270 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 NPAS2Q99743 824 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 CAPS2Q9BXY5 557 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 UNKQ9C0B0 810 aaKnown RBP14.92□□□□□ -0.02
CRLF3-203ENST00000578692 CAB39LQ9H9S4 337 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 PCDHGB6Q9Y5F9 930 aa14.92□□□□□ -0.02
CRLF3-203ENST00000578692 NBPF19A0A087WUL8 3843 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 WISP3O95389 354 aaPredicted RBP14.91□□□□□ -0.02
CRLF3-203ENST00000578692 CCDC166P0CW27 439 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 RNH1P13489 461 aaKnown RBP14.91□□□□□ -0.02
CRLF3-203ENST00000578692 CD96P40200 585 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 KCNK10P57789 538 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 TAS2R50P59544 299 aa14.91□□□□□ -0.02
CRLF3-203ENST00000578692 SRSF11Q05519 484 aaKnown RBP14.91□□□□□ -0.02
CRLF3-203ENST00000578692 TUBA3CQ13748 450 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms