RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 AASDHPPTQ9NRN7 309 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 DCAF13Q9NV06 445 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ZSCAN32Q9NX65 697 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 THUMPD1Q9NXG2 353 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 SLC25A37Q9NYZ2 338 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 DNAJB9Q9UBS3 223 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 NDRG2Q9UN36 371 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 ICKQ9UPZ9 632 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 WDR37Q9Y2I8 494 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ENTPD2Q9Y5L3 495 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 AP4B1Q9Y6B7 739 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 DGKBQ9Y6T7 804 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 CEP350Q5VT06 3117 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 KIR2DS5A0A0G2JLQ3 304 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 A0A0G2JNG1 304 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 A0A1W2PPV9 198 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 TMEM247A6NEH6 219 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 POM121BA6NF01 834 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 KIR2DS3K7RE56 304 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 NDUFS4O43181 175 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 SCN2BO60939 215 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 TNFAIP8O95379 198 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ETHE1O95571 254 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 VIPP01282 170 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 GSNP06396 782 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 LYNP07948 512 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 FURINP09958 794 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 FAM58BPP0C7Q3 252 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 LAMP1P11279 417 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 CTSEP14091 401 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ZNF26P17031 533 aaPredicted RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 ACSL1P33121 698 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 WNT3P56703 355 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 MEF2AQ02078 507 aaPredicted RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 RGS1Q08116 209 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 VAC14Q08AM6 782 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 SELPLGQ14242 412 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 KIR2DS5Q14953 304 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 CLCA4Q14CN2 919 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 SMAD2Q15796 467 aaKnown RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 VMACQ2NL98 169 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 KRT80Q6KB66 452 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ZCCHC8Q6NZY4 707 aaKnown RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 Q6ZSR6 202 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ARMCX6Q7L4S7 300 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 RD3Q7Z3Z2 195 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 MSRB3Q8IXL7 192 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 RNF175Q8N4F7 328 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 C11orf65Q8NCR3 313 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 TSTD1Q8NFU3 115 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ZFP28Q8NHY6 868 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 OR5P2Q8WZ92 322 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 HLA-CQ95604 372 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 PYURFQ96I23 114 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 RDH12Q96NR8 316 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 CIB1Q99828 191 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 MYOCQ99972 504 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 MENTQ9BUN1 341 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 SARGQ9BW04 601 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 TTYH1Q9H313 450 aaPredicted RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 SRMSQ9H3Y6 488 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 FGF22Q9HCT0 170 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 CD320Q9NPF0 282 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 PRDM8Q9NQV8 689 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 NDUFA13Q9P0J0 144 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 PCYT1BQ9Y5K3 369 aaPredicted RBP10.65□□□□□ -0.7
SKA2-204ENST00000578519 ORC6Q9Y5N6 252 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ANKRD12Q6UB98 2062 aa10.65□□□□□ -0.7
SKA2-204ENST00000578519 ZFC3H1O60293 1989 aaKnown RBP10.65□□□□□ -0.71
SKA2-204ENST00000578519 ZW10O43264 779 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 TPST1O60507 370 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 NDUFS2O75306 463 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 SH3BGRLO75368 114 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 RASAL1O95294 804 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 CST1P01037 141 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 FUCA1P04066 466 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 SERPIND1P05546 499 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 PIM1P11309 404 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 F3P13726 295 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 ZNF23P17027 643 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 HOXB9P17482 250 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 DDCP20711 480 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 ZNF10P21506 573 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 UQCRC2P22695 453 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 CD6P30203 668 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 CHI3L1P36222 383 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 SSR2P43308 183 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 PRIM2P49643 509 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 CCT8P50990 548 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 CLDN2P57739 230 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 RPS15AP62244 130 aaKnown RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 TXNL4AP83876 142 aaKnown RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 SLC9A5Q14940 896 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 RFX4Q33E94 735 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 OR4C11Q6IEV9 310 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 DUS1LQ6P1R4 473 aaKnown RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 SPRED1Q7Z699 444 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms