RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 NT5CQ8TCD5 201 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 EGFL8Q99944 293 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 AIF1LQ9BQI0 150 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 SPNS1Q9H2V7 528 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 PELI2Q9HAT8 420 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 SEC14L3Q9UDX4 400 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 IKZF3Q9UKT9 509 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 SLC22A14Q9Y267 594 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 PSAT1Q9Y617 370 aa14.05□□□□□ -0.16
RN7SL560P-201ENST00000577943 CENPEQ02224 2701 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 TRGV8A0A0C4DH27 118 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 FAM95CA0A1B0GW59 222 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 NPEPPSL1A6NEC2 478 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 EFCAB8A8MWE9 144 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 CDC7O00311 574 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 B4GALT2O60909 372 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 DNAJB6O75190 326 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 HNF4AP41235 474 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 PAFAH1B1P43034 410 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 REEP5Q00765 189 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 PMP22Q01453 160 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 RBPJQ06330 500 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 TUBA3CQ13748 450 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 FRG1Q14331 258 aaKnown RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 ZNF460Q14592 562 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 PPP1R3AQ16821 1122 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 TUBA3EQ6PEY2 450 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SLC34A3Q8N130 599 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SLC5A8Q8N695 610 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 TRPV3Q8NET8 790 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 UTP15Q8TED0 518 aaKnown RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 ANKRD7Q92527 254 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 RELTQ969Z4 430 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 PTCHD1Q96NR3 888 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SIGLEC12Q96PQ1 595 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 UTP23Q9BRU9 249 aaKnown RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 ANKRD10Q9NXR5 420 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SUCOQ9UBS9 1254 aaKnown RBP14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 PCDHGB6Q9Y5F9 930 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 SAR1BQ9Y6B6 198 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 KCNE2Q9Y6J6 123 aa14.04□□□□□ -0.16
RN7SL560P-201ENST00000577943 GABRR3A8MPY1 467 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CCDC188H7C350 402 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 PSMD12O00232 456 aaPredicted RBP14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 PRMT3O60678 531 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CD96P40200 585 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 SLC26A5P58743 744 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 RAB8AP61006 207 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CDKL1Q00532 357 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 OC90Q02509 493 aaPredicted RBP14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 FASTKD3Q14CZ7 662 aaKnown RBP14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 OR1C1Q15619 314 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 NXPE4Q6UWF7 544 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 FRA10AC1Q70Z53 315 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CYP4X1Q8N118 509 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 ANKRD53Q8N9V6 530 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 MDS2Q8NDY4 140 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 VPS39Q96JC1 886 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 NPAS2Q99743 824 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CDCP1Q9H5V8 836 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 NSMCE4AQ9NXX6 385 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 MOCS1Q9NZB8 636 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CTNNAL1Q9UBT7 734 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 SH3BGRL2Q9UJC5 107 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 OARD1Q9Y530 152 aa14.03□□□□□ -0.16
RN7SL560P-201ENST00000577943 CACNA1CQ13936 2221 aa14.02□□□□□ -0.16
RN7SL560P-201ENST00000577943 NCOA6Q14686 2063 aaPredicted RBP14.02□□□□□ -0.16
RN7SL560P-201ENST00000577943 EML6Q6ZMW3 1958 aa14.02□□□□□ -0.16
RN7SL560P-201ENST00000577943 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 E7ESA3 106 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 FAM227AF5H4B4 570 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 CCL21O00585 134 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 NDC80O14777 642 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 MAN1A2O60476 641 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 RNH1P13489 461 aaKnown RBP14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 CD46P15529 392 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 EEF1DP29692 281 aaKnown RBP14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 HNMTP50135 292 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 SLC12A2P55011 1212 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 TAS2R39P59534 338 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 BTG2P78543 158 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 TOR1AIP1Q5JTV8 583 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 SPINK14Q6IE38 97 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 QSOX2Q6ZRP7 698 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 CAPN12Q6ZSI9 719 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 ADAMTSL2Q86TH1 951 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 ZBED8Q8IZ13 594 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 HORMAD2Q8N7B1 307 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 TMEM178AQ8NBL3 297 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 HES7Q9BYE0 225 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 SLC6A16Q9GZN6 736 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 RHBGQ9H310 441 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 KLHL31Q9H511 634 aa14.02□□□□□ -0.17
RN7SL560P-201ENST00000577943 CLK4Q9HAZ1 481 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms