RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NDC1Q9BTX1 674 aa10.02□□□□□ -0.8
PTPRM-205ENST00000577827 MROQ9BYG7 248 aa10.02□□□□□ -0.8
PTPRM-205ENST00000577827 TGFB1P01137 390 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 S100A6P06703 90 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ANXA3P12429 323 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 JUPP14923 745 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 SLC9A3P48764 834 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 STXBP1P61764 594 aaKnown RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 EMX1Q04741 257 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 GPR17Q13304 367 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF691Q5VV52 312 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 KCTD11Q693B1 232 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 LINGO2Q7L985 606 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 KRT77Q7Z794 578 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 NPAS4Q8IUM7 802 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 HYLS1Q96M11 299 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 S100A13Q99584 98 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 TXNRD2Q9NNW7 524 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ENAMQ9NRM1 1142 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 RCBTB2O95199 551 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ADAP00813 363 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 VIPP01282 170 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 HOXD8P13378 290 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 HOXA11P31270 313 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 NRIP1P48552 1158 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 SLC9A5Q14940 896 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 MAD2L1BPQ15013 274 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 UPP1Q16831 310 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 EXOC3L2Q2M3D2 409 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF789Q5FWF6 425 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 Q8N402 240 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 OR5AK3PQ8NH89 298 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 OVCA2Q8WZ82 227 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 DNASE1L2Q92874 299 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 RGMAQ96B86 450 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 CCM2Q9BSQ5 444 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 IFT27Q9BW83 186 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 RAB11FIP5Q9BXF6 653 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 RDH8Q9NYR8 311 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 MARK1Q9P0L2 795 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 CD300AQ9UGN4 299 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 MAGED1Q9Y5V3 778 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 WASH4PA8MWX3 477 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF879B4DU55 563 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 HCN1O60741 890 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 LDOC1O95751 146 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 C6orf47O95873 294 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ADH1CP00326 375 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 CSNK2A2P19784 350 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 CFL1P23528 166 aaKnown RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 MPIP34949 423 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PPP2R2BQ00005 443 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 TRAM1Q15629 374 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PRAMEF14Q5SWL7 426 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 AGAP6Q5VW22 663 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PRAMEF13Q5VWM6 474 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 FRRS1Q6ZNA5 592 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PTRH1Q86Y79 214 aaKnown RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 PSD4Q8NDX1 1056 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 CCDC107Q8WV48 283 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 OSTF1Q92882 214 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 DUS3LQ96G46 650 aaKnown RBP10.02□□□□□ -0.81
PTPRM-205ENST00000577827 UBXN10Q96LJ8 280 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 AGAP4Q96P64 663 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 OR51V1Q9H2C8 321 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 TCF7L1Q9HCS4 588 aa10.02□□□□□ -0.81
PTPRM-205ENST00000577827 DDX60Q8IY21 1712 aaKnown RBP10.01□□□□□ -0.81
PTPRM-205ENST00000577827 HMX2A2RU54 273 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 FAM170BA6NMN3 283 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 KLK1P06870 262 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 ACADMP11310 421 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 AGXTP21549 392 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 KCNA5P22460 613 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 UQCRC2P22695 453 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 PCSK6P29122 969 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 MAGEA2P43356 314 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 HTR6P50406 440 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 GSTM4Q03013 218 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 SF1Q15637 639 aaKnown RBP10.01□□□□□ -0.81
PTPRM-205ENST00000577827 TBCEQ15813 527 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-205ENST00000577827 PSAPL1Q6NUJ1 521 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 SH2D5Q6ZV89 423 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 RD3Q7Z3Z2 195 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 JAZF1Q86VZ6 243 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 COMMD2Q86X83 199 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 PELI3Q8N2H9 469 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 RFT1Q96AA3 541 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 C3orf30Q96M34 536 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 EPYCQ99645 322 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 ZNF717Q9BY31 904 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-205ENST00000577827 ACTR6Q9GZN1 396 aa10.01□□□□□ -0.81
PTPRM-205ENST00000577827 IMP3Q9NV31 184 aaKnown RBP10.01□□□□□ -0.81
PTPRM-205ENST00000577827 IKZF2Q9UKS7 526 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms