RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DNASE1P24855 282 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 RFC3P40938 356 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 BASP1P80723 227 aaKnown RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 LRRC8EQ6NSJ5 796 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 UBE2R2Q712K3 238 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 ABHD13Q7L211 337 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 KIAA1328Q86T90 577 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 CILP2Q8IUL8 1156 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 CCDC71Q8IV32 467 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 OR10Q1Q8NGQ4 319 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 MFSD3Q96ES6 412 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 RMND5BQ96G75 393 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 CCDC138Q96M89 665 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 PTCHD1Q96NR3 888 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 POLDIP3Q9BY77 421 aaKnown RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 CLK4Q9HAZ1 481 aaKnown RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 GALPQ9UBC7 116 aa12.49□□□□□ -0.41
COPS3-214ENST00000577246 PACSIN2Q9UNF0 486 aaPredicted RBP12.49□□□□□ -0.41
COPS3-214ENST00000577246 FEZF1A0PJY2 475 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 OR14I1A6ND48 311 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 GOLGA8KD6RF30 607 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 GOLGA8TH3BQL2 631 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PSMD12O00232 456 aaPredicted RBP12.48□□□□□ -0.41
COPS3-214ENST00000577246 BCKDKO14874 412 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 NDUFS4O43181 175 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 GALR3O60755 368 aaPredicted RBP12.48□□□□□ -0.41
COPS3-214ENST00000577246 CTAG2O75638 210 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PDE9AO76083 593 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 FTCDO95954 541 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 ALOX12P18054 663 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PTMSP20962 102 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 ACVR2AP27037 513 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 COILP38432 576 aaPredicted RBP12.48□□□□□ -0.41
COPS3-214ENST00000577246 CLCN2P51788 898 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 NUP107P57740 925 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 CDK16Q00536 496 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 RGS1Q08116 209 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PWP1Q13610 501 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 CEBPEQ15744 281 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 CAMKMTQ7Z624 323 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PALM2Q8IXS6 379 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 OR5T3Q8NGG3 340 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 NRGNQ92686 78 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 ALPK1Q96QP1 1244 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 SARGQ9BW04 601 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 SOX13Q9UN79 622 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 COMMD10Q9Y6G5 202 aa12.48□□□□□ -0.41
COPS3-214ENST00000577246 A0A1B0GTL3 188 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 URADA6NGE7 173 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 CHST10O43529 356 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 B4GALT2O60909 372 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 ETS1P14921 441 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 MGAT1P26572 445 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 ZFP36L2P47974 494 aaKnown RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 GPR85P60893 370 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 SARNPP82979 210 aaKnown RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 PLGLB1Q02325 96 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 CUL1Q13616 776 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 TERF2Q15554 542 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 SLC25A35Q3KQZ1 300 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 GXYLT1Q4G148 440 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 DEFB134Q4QY38 66 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 KIAA0408Q6ZU52 694 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 CENPUQ71F23 418 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 SLC22A16Q86VW1 577 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 SHISA5Q8N114 240 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 GPATCH11Q8N954 259 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 ZNF740Q8NDX6 193 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 B3GNT7Q8NFL0 401 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 GOT1L1Q8NHS2 421 aaPredicted RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 C1orf54Q8WWF1 131 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 HES6Q96HZ4 224 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 CCDC77Q9BR77 488 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 CLEC4MQ9H2X3 399 aaPredicted RBP12.47□□□□□ -0.41
COPS3-214ENST00000577246 SYBUQ9NX95 663 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 DHRS7Q9Y394 339 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 L3MBTL1Q9Y468 752 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 SCN2AQ99250 2005 aa12.47□□□□□ -0.41
COPS3-214ENST00000577246 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 TCRBV16S1A1N1A0A5B0 115 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 NPIPA2E9PIF3 369 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms