RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SLC29A3Q9BZD2 475 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ADAP2Q9NPF8 381 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 C5AR2Q9P296 337 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 EIF3KQ9UBQ5 218 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 IL20RAQ9UHF4 553 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ABCG2Q9UNQ0 655 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 YIPF1Q9Y548 306 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 A0A1W2PPK0 400 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM92AA1XBS5 289 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 CTDSP2O14595 271 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 TOXO94900 526 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 CAPNS1P04632 268 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 ALPLP05186 524 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 PPP2R2BQ00005 443 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 KCNJ8Q15842 424 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 SHQ1Q6PI26 577 aaKnown RBP17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 OR2T11Q8NH01 316 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 DNAJB8Q8NHS0 232 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 PLD4Q96BZ4 506 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.35
ATPAF1-214ENST00000576409 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 CAPN15O75808 1086 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 EOMESO95936 686 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SELPP16109 830 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SP3Q02447 781 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 LASP1Q14847 261 aaKnown RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 TPRG1Q6ZUI0 275 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 GPR78Q96P69 363 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM120CQ9NX05 1096 aaKnown RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 ENPP5Q9UJA9 477 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 BNC1Q01954 994 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 DOC2AQ14183 400 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 Q6ZSR9 355 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 NAGSQ8N159 534 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SLC37A3Q8NCC5 494 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 ARRDC2Q8TBH0 407 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 LRRC20Q8TCA0 184 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 PGAP3Q96FM1 320 aaPredicted RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SLITRK2Q9H156 845 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 NFKBIL1Q9UBC1 381 aaPredicted RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 TAC3Q9UHF0 121 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 OR10H1Q9Y4A9 318 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 COL4A1P02462 1669 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 RPS17P08708 135 aaKnown RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM163BP0C2L3 166 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FSHRP23945 695 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SLC3A1Q07837 685 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 OTOP2Q7RTS6 562 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 C9orf43Q8TAL5 461 aaPredicted RBP17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 SLC35G5Q96KT7 338 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 C3orf14Q9HBI5 128 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FNIP2Q9P278 1114 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 FBXO10Q9UK96 956 aa17.26■□□□□ 0.35
ATPAF1-214ENST00000576409 WNT9AO14904 365 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 OR10H2O60403 315 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 GSRP00390 522 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 PCCBP05166 539 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 MAT2AP31153 395 aaKnown RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CLDN8P56748 225 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 RPL6Q02878 288 aaKnown RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 GINS1Q14691 196 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ATAT1Q5SQI0 421 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 LRRC70Q7Z2Q7 622 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ZSWIM9Q86XI8 627 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IL17FQ96PD4 163 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 MMP28Q9H239 520 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ZDHHC4Q9NPG8 344 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 NECTIN3Q9NQS3 549 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IL37Q9NZH6 218 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 NDOR1Q9UHB4 597 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IKZF2Q9UKS7 526 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM25EA8MYX2 175 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 HPRP00739 348 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IFNA16P05015 189 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 PTGER1P34995 402 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 PGFP49763 221 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 AP2S1P53680 142 aaPredicted RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 AP1S2P56377 157 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 COMMD2Q86X83 199 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 SH3RF2Q8TEC5 729 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 TP63Q9H3D4 680 aaPredicted RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 SPATA7Q9P0W8 599 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CD300AQ9UGN4 299 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM86C2PA6NEL3 165 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CNR2P34972 360 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF45Q02386 682 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 BIKQ13323 160 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 APOFQ13790 326 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 SLC9A5Q14940 896 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 HSDL2Q6YN16 418 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CNTN4Q8IWV2 1026 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 GOLM1Q8NBJ4 401 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms