RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 H0YIV9 168 aa15.04■□□□□ -0
NUP88-207ENST00000573584 M0R129 80 aa15.04■□□□□ -0
NUP88-207ENST00000573584 POU2F1P14859 743 aa15.04■□□□□ -0
NUP88-207ENST00000573584 HNF4AP41235 474 aa15.04■□□□□ -0
NUP88-207ENST00000573584 UGT2B15P54855 530 aa15.04■□□□□ -0
NUP88-207ENST00000573584 CAP1Q01518 475 aa15.04■□□□□ -0
NUP88-207ENST00000573584 TCTN1Q2MV58 587 aa15.04■□□□□ -0
NUP88-207ENST00000573584 LRIT3Q3SXY7 679 aa15.04■□□□□ -0
NUP88-207ENST00000573584 CCBE1Q6UXH8 406 aaPredicted RBP15.04■□□□□ -0
NUP88-207ENST00000573584 OR4K1Q8NGD4 311 aa15.04■□□□□ -0
NUP88-207ENST00000573584 COQ8BQ96D53 544 aa15.04■□□□□ -0
NUP88-207ENST00000573584 TCF25Q9BQ70 676 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ZDHHC6Q9H6R6 413 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ZNF556Q9HAH1 456 aa15.04■□□□□ -0
NUP88-207ENST00000573584 SIAEQ9HAT2 523 aa15.04■□□□□ -0
NUP88-207ENST00000573584 GPATCH2Q9NW75 528 aa15.04■□□□□ -0
NUP88-207ENST00000573584 B4GALT6Q9UBX8 382 aa15.04■□□□□ -0
NUP88-207ENST00000573584 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
NUP88-207ENST00000573584 ARHGEF33A8MVX0 844 aa15.03■□□□□ -0
NUP88-207ENST00000573584 PLK4O00444 970 aa15.03■□□□□ -0
NUP88-207ENST00000573584 PTX3P26022 381 aaPredicted RBP15.03■□□□□ -0
NUP88-207ENST00000573584 NKX2-5P52952 324 aaPredicted RBP15.03■□□□□ -0
NUP88-207ENST00000573584 EIF4HQ15056 248 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 CYP27C1Q4G0S4 372 aa15.03■□□□□ -0
NUP88-207ENST00000573584 ZDHHC20Q5W0Z9 365 aa15.03■□□□□ -0
NUP88-207ENST00000573584 ZNF852Q6ZMS4 543 aa15.03■□□□□ -0
NUP88-207ENST00000573584 CAMKMTQ7Z624 323 aa15.03■□□□□ -0
NUP88-207ENST00000573584 FAM217AQ8IXS0 508 aa15.03■□□□□ -0
NUP88-207ENST00000573584 CRIPAKQ8N1N5 446 aa15.03■□□□□ -0
NUP88-207ENST00000573584 B3GNT7Q8NFL0 401 aa15.03■□□□□ -0
NUP88-207ENST00000573584 OR9Q2Q8NGE9 314 aa15.03■□□□□ -0
NUP88-207ENST00000573584 CRELD1Q96HD1 420 aa15.03■□□□□ -0
NUP88-207ENST00000573584 METTL2AQ96IZ6 378 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 BRF2Q9HAW0 419 aa15.03■□□□□ -0
NUP88-207ENST00000573584 LSM7Q9UK45 103 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 PCDHGB6Q9Y5F9 930 aa15.03■□□□□ -0
NUP88-207ENST00000573584 A0A1W2PQ45 241 aaPredicted RBP15.03■□□□□ -0
NUP88-207ENST00000573584 A0A1W2PQY0 241 aa15.03■□□□□ -0
NUP88-207ENST00000573584 HSD3B1P14060 373 aa15.03■□□□□ -0
NUP88-207ENST00000573584 HSD3B2P26439 372 aa15.03■□□□□ -0
NUP88-207ENST00000573584 FOXD4Q12950 439 aaPredicted RBP15.03■□□□□ -0
NUP88-207ENST00000573584 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 SPANXN2Q5MJ10 180 aa15.03■□□□□ -0
NUP88-207ENST00000573584 TPGS2Q68CL5 300 aa15.03■□□□□ -0
NUP88-207ENST00000573584 GRHL2Q6ISB3 625 aa15.03■□□□□ -0
NUP88-207ENST00000573584 AGTRAPQ6RW13 159 aa15.03■□□□□ -0
NUP88-207ENST00000573584 GDPD3Q7L5L3 318 aa15.03■□□□□ -0
NUP88-207ENST00000573584 BBS7Q8IWZ6 715 aa15.03■□□□□ -0
NUP88-207ENST00000573584 SCAMP4Q969E2 229 aa15.03■□□□□ -0
NUP88-207ENST00000573584 ROGDIQ9GZN7 287 aa15.03■□□□□ -0
NUP88-207ENST00000573584 EHD1Q9H4M9 534 aa15.03■□□□□ -0
NUP88-207ENST00000573584 ZNF334Q9HCZ1 680 aaPredicted RBP15.03■□□□□ -0
NUP88-207ENST00000573584 TAS2R16Q9NYV7 291 aa15.03■□□□□ -0
NUP88-207ENST00000573584 KLK4Q9Y5K2 254 aa15.03■□□□□ -0
NUP88-207ENST00000573584 OR2AG2A6NM03 316 aa15.03■□□□□ -0
NUP88-207ENST00000573584 RNASET2O00584 256 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 EFEMP2O95967 443 aa15.03■□□□□ -0
NUP88-207ENST00000573584 SOX6P35712 828 aa15.03■□□□□ -0
NUP88-207ENST00000573584 PRIM2P49643 509 aa15.03■□□□□ -0
NUP88-207ENST00000573584 MVDP53602 400 aa15.03■□□□□ -0
NUP88-207ENST00000573584 LIMK1P53667 647 aa15.03■□□□□ -0
NUP88-207ENST00000573584 HBA1P69905 142 aa15.03■□□□□ -0
NUP88-207ENST00000573584 KRR1Q13601 381 aaKnown RBP15.03■□□□□ -0
NUP88-207ENST00000573584 DMC1Q14565 340 aa15.03■□□□□ -0
NUP88-207ENST00000573584 SF3B4Q15427 424 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■□ 22.4
NUP88-207ENST00000573584 CYP4Z2PQ8N1L4 340 aa15.03■□□□□ -0
NUP88-207ENST00000573584 OR7G3Q8NG95 312 aa15.03■□□□□ -0
NUP88-207ENST00000573584 HUS1BQ8NHY5 278 aa15.03■□□□□ -0
NUP88-207ENST00000573584 FIBINQ8TAL6 211 aa15.03■□□□□ -0
NUP88-207ENST00000573584 CHTF18Q8WVB6 975 aa15.03■□□□□ -0
NUP88-207ENST00000573584 OR4K3Q96R72 315 aa15.03■□□□□ -0
NUP88-207ENST00000573584 HOXD1Q9GZZ0 328 aa15.03■□□□□ -0
NUP88-207ENST00000573584 MKLN1Q9UL63 735 aa15.03■□□□□ -0
NUP88-207ENST00000573584 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
NUP88-207ENST00000573584 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.02■□□□□ -0
NUP88-207ENST00000573584 PRAMEF25A6NGN4 478 aa15.02■□□□□ -0
NUP88-207ENST00000573584 J3KTA2 159 aa15.02■□□□□ -0
NUP88-207ENST00000573584 PSMD11O00231 422 aa15.02■□□□□ -0
NUP88-207ENST00000573584 DYRK3O43781 588 aa15.02■□□□□ -0
NUP88-207ENST00000573584 TEKQ02763 1124 aa15.02■□□□□ -0
NUP88-207ENST00000573584 IRF3Q14653 427 aa15.02■□□□□ -0
NUP88-207ENST00000573584 MED22Q15528 200 aa15.02■□□□□ -0
NUP88-207ENST00000573584 ATL1Q8WXF7 558 aa15.02■□□□□ -0
NUP88-207ENST00000573584 FOXJ1Q92949 421 aa15.02■□□□□ -0
NUP88-207ENST00000573584 GTPBP3Q969Y2 492 aaKnown RBP15.02■□□□□ -0
NUP88-207ENST00000573584 EHD3Q9NZN3 535 aa15.02■□□□□ -0
NUP88-207ENST00000573584 MAPRE3Q9UPY8 281 aa15.02■□□□□ -0
NUP88-207ENST00000573584 PNMA8CA0A1B0GUJ8 204 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 TMEM202A6NGA9 273 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 KIAA0513O60268 411 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 TNFRSF21O75509 655 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SLCO2B1O94956 709 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SLC10A3P09131 477 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 GSTM1P09488 218 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 ITGA2P17301 1181 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 RCVRNP35243 200 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 DEFA1P59665 94 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 DEFA3P59666 94 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SCARB2Q14108 478 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 CCSMST1Q4G0I0 132 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms