RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 AHRP35869 848 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GMPRP36959 345 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 TSFMP43897 325 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 AGTR2P50052 363 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 ZNF33BQ06732 778 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 ACTN3Q08043 901 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 ABRAXAS2Q15018 415 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 TGFBIQ15582 683 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 NSDHLQ15738 373 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 FBXO48Q5FWF7 155 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 TOR1AIP1Q5JTV8 583 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 RAPH1Q70E73 1250 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 CYS1Q717R9 158 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GPSM1Q86YR5 675 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 ANKRD53Q8N9V6 530 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 TRPV3Q8NET8 790 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GRHL3Q8TE85 626 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 UTP15Q8TED0 518 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 CCT6BQ92526 530 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 PSMF1Q92530 271 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 EXT2Q93063 718 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 RHBDF1Q96CC6 855 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 MRRFQ96E11 262 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 GPR22Q99680 433 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 PHACTR1Q9C0D0 580 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 RHBGQ9H310 441 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 PRM3Q9NNZ6 103 aa11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 MDC1Q14676 2089 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-213ENST00000573519 URADA6NGE7 173 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CYSRT1A8MQ03 144 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CHST10O43529 356 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 B4GALT2O60909 372 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 DNAJB6O75190 326 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 S100BP04271 92 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 FHP07954 510 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CYC1P08574 325 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 C1GALT1C1LP0DN25 315 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CD1DP15813 335 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 IL10P22301 178 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 JAK1P23458 1154 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 STX2P32856 288 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 SLC6A12P48065 614 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 RAB10P61026 200 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 ATP6V0D1P61421 351 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 SLBPQ14493 270 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 SFT2D3Q587I9 215 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 GRTP1Q5TC63 336 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 NIPAL1Q6NVV3 410 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 FAM180AQ6UWF9 173 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 TCAIMQ8N3R3 496 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 AFAP1L2Q8N4X5 818 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 SNX31Q8N9S9 440 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 SSC4DQ8WTU2 575 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 TSLPQ969D9 159 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 ESAMQ96AP7 390 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 TBC1D20Q96BZ9 403 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 OR1F2PQ96R84 312 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 KLHL31Q9H511 634 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 CD274Q9NZQ7 290 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 TEKT2Q9UIF3 430 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 RNF112Q9ULX5 631 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 HEATR5BQ9P2D3 2071 aa11.97□□□□□ -0.49
NPLOC4-213ENST00000573519 FLNCQ14315 2725 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 PSMD12O00232 456 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 CLGNO14967 610 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 WISP3O95389 354 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 WDPCPO95876 746 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 HSPA7P48741 367 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 TNFSF10P50591 281 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 OR4D2P58180 307 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 RHAGQ02094 409 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 OR4D1Q15615 310 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 FCRLBQ6BAA4 426 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 PLAG1Q6DJT9 500 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 PAPD4Q6PIY7 484 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 CMC1Q7Z7K0 106 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 CYP4X1Q8N118 509 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 KRT78Q8N1N4 520 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 SUN3Q8TAQ9 357 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 HAS2Q92819 552 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 FAR2Q96K12 515 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 LPAR4Q99677 370 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 TMEM79Q9BSE2 394 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 CAPS2Q9BXY5 557 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 SLC6A16Q9GZN6 736 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 KCNK13Q9HB14 408 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 LANCL2Q9NS86 450 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 DNAJC11Q9NVH1 559 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
NPLOC4-213ENST00000573519 ANKRD12Q6UB98 2062 aa11.96□□□□□ -0.5
NPLOC4-213ENST00000573519 A0A0G2JN53 185 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms