RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ANKRD26P1Q6NSI1 321 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 IZUMO2Q6UXV1 221 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 STK32CQ86UX6 486 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ULK2Q8IYT8 1036 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PHTF2Q8N3S3 785 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 COX18Q8N8Q8 333 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 OR4K1Q8NGD4 311 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 OR6Y1Q8NGX8 325 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 OR5AK3PQ8NH89 298 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 CCL4L1Q8NHW4 92 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PATE1Q8WXA2 126 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PYDC1Q8WXC3 89 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 YIPF4Q9BSR8 244 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ARRDC1-AS1Q9H2J1 176 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ADNPQ9H2P0 1102 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ZNF282Q9UDV7 671 aaPredicted RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 HCN2Q9UL51 889 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 EMCNQ9ULC0 261 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 E7ENX8 843 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 POLR1CO15160 346 aaPredicted RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 ADAM23O75077 832 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 RPS17P08708 135 aaKnown RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 CHRM5P08912 532 aaPredicted RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 UMPSP11172 480 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 RNH1P13489 461 aaKnown RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 IMPA1P29218 277 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PRDX3P30048 256 aaKnown RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 TIA1P31483 386 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMG6-213ENST00000573166 TAP2Q03519 686 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 LIPEQ05469 1076 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ZP2Q05996 745 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 IER5LQ5T953 404 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 NIPAL1Q6NVV3 410 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PATL1Q86TB9 770 aaKnown RBP9.71□□□□□ -0.86
SMG6-213ENST00000573166 FBXL6Q8N531 539 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 EXO5Q9H790 373 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PELI2Q9HAT8 420 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ELOVL7A1L3X0 281 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 AP3D1O14617 1153 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SUV39H1O43463 412 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 BCKDHAP12694 445 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SLC16A1P53985 500 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 MTPNP58546 118 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 TMEM35AQ53FP2 167 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 NLRP8Q86W28 1048 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PGAM4Q8N0Y7 254 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 NATD1Q8N6N6 113 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 DLG3Q92796 817 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 ELF4Q99607 663 aaPredicted RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 GORASP1Q9BQQ3 440 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 REEP1Q9H902 201 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 LYARQ9NX58 379 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 PPIL1Q9Y3C6 166 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SNX5Q9Y5X3 404 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 ERN1O75460 977 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 CEACAM5P06731 702 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 RBMS1P29558 406 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 MASP1P48740 699 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CENPAP49450 140 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CDKL1Q00532 357 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PWP1Q13610 501 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 GLYATQ6IB77 296 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CGB2Q6NT52 195 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 P3H2Q8IVL5 708 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 EID3Q8N140 333 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CHCHD4Q8N4Q1 142 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 OR4K14Q8NGD5 310 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 OR8D2Q9GZM6 311 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PRTFDC1Q9NRG1 225 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PAPOLBQ9NRJ5 636 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 HCN3Q9P1Z3 774 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 ERVK-11Q9UQG0 969 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SH3GLB1Q9Y371 365 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PRSS51A0A1B0GVH4 220 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SLC5A10A0PJK1 596 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 REM1O75628 298 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 IL3P08700 152 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 RAD23AP54725 363 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 OC90Q02509 493 aaPredicted RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 HERC3Q15034 1050 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CCSMST1Q4G0I0 132 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 KHDRBS2Q5VWX1 349 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 ZFP1Q6P2D0 407 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 ERICH5Q6P6B1 374 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 SBSNQ6UWP8 590 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 ZFAND4Q86XD8 727 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 HPS6Q86YV9 775 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 ROPN1LQ96C74 230 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 MACROD1Q9BQ69 325 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 CUEDC1Q9NWM3 386 aaPredicted RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 SLC23A2Q9UGH3 650 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 PLCL2Q9UPR0 1127 aa9.7□□□□□ -0.86
SMG6-213ENST00000573166 ZFR2Q9UPR6 939 aaKnown RBP9.7□□□□□ -0.86
SMG6-213ENST00000573166 TSPAN11A1L157 253 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms