RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GEMIN6Q8WXD5 167 aaKnown RBP10.36□□□□□ -0.75
CCDC40-207ENST00000572253 CENPOQ9BU64 300 aa10.36□□□□□ -0.75
CCDC40-207ENST00000572253 BRF2Q9HAW0 419 aa10.36□□□□□ -0.75
CCDC40-207ENST00000572253 SPATA6Q9NWH7 488 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-207ENST00000572253 NPAP1Q9NZP6 1156 aa10.36□□□□□ -0.75
CCDC40-207ENST00000572253 E9PQ18 207 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GFRA2O00451 464 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CCNB2O95067 398 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CD72P21854 359 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CCND3P30281 292 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 NKX2-5P52952 324 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 MRPS15P82914 257 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 RUNX1T1Q06455 604 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 NAE1Q13564 534 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 IQCCQ4KMZ1 466 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CCSAPQ6IQ19 270 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GDPD3Q7L5L3 318 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CLIP4Q8N3C7 705 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GPR156Q8NFN8 814 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 OR9Q1Q8NGQ5 310 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 WDR36Q8NI36 951 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 REPS1Q96D71 796 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 MGLLQ99685 303 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ZNF226Q9NYT6 803 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CNOT2Q9NZN8 540 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 FAM8A1Q9UBU6 413 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GABRQQ9UN88 632 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 YIPF1Q9Y548 306 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 BACE2Q9Y5Z0 518 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 A8MVJ9 347 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 RNASET2O00584 256 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 RGS5O15539 181 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 SH3BGRLO75368 114 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CATP04040 527 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PRKAR2AP13861 404 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CHI3L1P36222 383 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PIK3CBP42338 1070 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PFN3P60673 137 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ARMC4Q5T2S8 1044 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GRHL2Q6ISB3 625 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 B3GNT7Q8NFL0 401 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CHTF18Q8WVB6 975 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CXorf40BQ96DE9 158 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 VPS35Q96QK1 796 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 OR2B2Q9GZK3 357 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PRDM8Q9NQV8 689 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 GRIP1Q9Y3R0 1128 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PRAMEF4O60810 478 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 SLITRK5O94991 958 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 SRPRAP08240 638 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ZNF24P17028 368 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 RPL3P39023 403 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 FCHO2Q0JRZ9 810 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CRHR2Q13324 411 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ZNF362Q5T0B9 420 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 PRAMEF9Q5VWM5 478 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 SLX4IPQ5VYV7 408 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 VRK3Q8IV63 474 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 OXR1Q8N573 874 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 WDR20Q8TBZ3 569 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 CHAC2Q8WUX2 184 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 TRMT2BQ96GJ1 504 aaKnown RBP10.35□□□□□ -0.75
CCDC40-207ENST00000572253 KCNS3Q9BQ31 491 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ABCB8Q9NUT2 735 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 OGDHLQ9ULD0 1010 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 ANGPT4Q9Y264 503 aa10.35□□□□□ -0.75
CCDC40-207ENST00000572253 IGLV3-16A0A075B6K0 115 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 PRRG1O14668 218 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 KMOO15229 486 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 PCDH7O60245 1069 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 GADD45GO95257 159 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 HLA-EP13747 358 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 POLR2EP19388 210 aaKnown RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 POU1F1P28069 291 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 GRK5P34947 590 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 OR1E2P47887 323 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 PNLIPRP1P54315 467 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 GAB1Q13480 694 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 GTPBP3Q969Y2 492 aaKnown RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 PIP5K1AQ99755 562 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 SLC35A5Q9BS91 424 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TP63Q9H3D4 680 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CCDC177Q9NQR7 707 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 THSD1Q9NS62 852 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 A0A075B6Q4 140 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 C1orf226A1L170 272 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 H0YIV9 168 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 MFN2O95140 757 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TNFRSF1BP20333 461 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 IDSP22304 550 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TCEA1P23193 301 aaKnown RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TIA1P31483 386 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ETV6P41212 452 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ZXDCQ2QGD7 858 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms