RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ATP6V1G3Q96LB4 118 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 ADAD1Q96M93 576 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 FRG2BQ96QU4 278 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 XPO6Q96QU8 1125 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 EBNA1BP2Q99848 306 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 TBL1YQ9BQ87 522 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 MGME1Q9BQP7 344 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 GPATCH1Q9BRR8 931 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 FEM1AQ9BSK4 669 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 TUBB6Q9BUF5 446 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PRO3102Q9H379 93 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 VPS37BQ9H9H4 285 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 MRM3Q9HC36 420 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SPHK2Q9NRA0 654 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SLC6A13Q9NSD5 602 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SERTAD4Q9NUC0 356 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SELENONQ9NZV5 590 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 BTBD3Q9Y2F9 522 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 HEMK1Q9Y5R4 338 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 NFS1Q9Y697 457 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 IKBKGQ9Y6K9 419 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 A0A1W2PQ67 120 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 TCRBV7S3A2A0A539 114 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 GOLGA8MH3BSY2 632 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 J3KR12 359 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 CLIC1O00299 241 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 RGS16O15492 202 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 HCRTR2O43614 444 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 PRAMEF12O95522 483 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 FGF1P05230 155 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ITGAMP11215 1152 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 GJA1P17302 382 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ACVRL1P37023 503 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ELK3P41970 407 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 CSNK1DP48730 415 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 CAMPP49913 170 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 AP1S1P61966 158 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ZXDBP98169 803 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 PDE1BQ01064 536 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 GAD2Q05329 585 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 SLC10A7Q0GE19 358 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 HYAL1Q12794 435 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ANXA2RQ3ZCQ2 193 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF628Q5EBL2 1059 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 RNASE12Q5GAN4 147 aaKnown RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 TCEAL5Q5H9L2 206 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 SPANXN3Q5MJ09 141 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 FNBP1LQ5T0N5 605 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 RARS2Q5T160 578 aaKnown RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 STXBP5Q5T5C0 1151 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 LGSNQ5TDP6 509 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 VWA5B1Q5TIE3 1220 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM268Q5VZI3 342 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 STEAP4Q687X5 459 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 C3orf62Q6ZUJ4 267 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 MOB3CQ70IA8 216 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 MTSS1LQ765P7 747 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF534Q76KX8 674 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 KBTBD6Q86V97 674 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ARID3BQ8IVW6 561 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ISG20Q96AZ6 181 aaKnown RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 TADA1Q96BN2 335 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 C9orf72Q96LT7 481 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 NUDCD1Q96RS6 583 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 RANBP9Q96S59 729 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ADOQ96SZ5 270 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 CITED2Q99967 270 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 C19orf43Q9BQ61 176 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 AIFM2Q9BRQ8 373 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 MLPHQ9BV36 600 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 BBS2Q9BXC9 721 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 C1QTNF1Q9BXJ1 281 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 TMBIM4Q9HC24 238 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 NT5MQ9NPB1 228 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ABCB8Q9NUT2 735 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 PSD3Q9NYI0 1048 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 ABI3Q9P2A4 366 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 PSMC3IPQ9P2W1 217 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-222ENST00000570139 LGALS13Q9UHV8 139 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 SLC8A2Q9UPR5 921 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 OR51B4Q9Y5P0 310 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 NOTCH4Q99466 2003 aa6.89□□□□□ -1.31
CNOT1-222ENST00000570139 MIA3Q5JRA6 1907 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KIAA1549LQ6ZVL6 1849 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 A0A0D9SEW6 157 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 HEATR9A2RTY3 570 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 EPOPA6NHQ4 379 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 H0YIZ8 118 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 INSIG1O15503 277 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KIF1CO43896 1103 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SOCS5O75159 536 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ZMPSTE24O75844 475 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PAPSS2O95340 614 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SYF2O95926 243 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 IGSF6O95976 241 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms