RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZNF462Q96JM2 2506 aa13.08□□□□□ -0.32
HERPUD1-218ENST00000569569 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 ANKDD1BA6NHY2 528 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 K7EM74 188 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 SUV39H1O43463 412 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PRAMEF4O60810 478 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 RDH16O75452 317 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 SMIM10L1P0DMW3 83 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 EPB42P16452 691 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 EPORP19235 508 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 NR1D1P20393 614 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 IL10P22301 178 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 XCR1P46094 333 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 AGTR2P50052 363 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PGDP52209 483 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 ALDH18A1P54886 795 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 IRF8Q02556 426 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 CHIT1Q13231 466 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 DOC2AQ14183 400 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 E2F2Q14209 437 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 SETDB1Q15047 1291 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PFKFB4Q16877 469 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PAGE2BQ5JRK9 111 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 PRAMEF9Q5VWM5 478 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 TIFABQ6ZNK6 161 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■□□□□ 9.2
HERPUD1-218ENST00000569569 OR11G2Q8NGC1 345 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 SMIM10Q96HG1 83 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 CLK4Q9HAZ1 481 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 HCN3Q9P1Z3 774 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 FBXL4Q9UKA2 621 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 MKL2Q9ULH7 1088 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF451Q9Y4E5 1061 aa13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 TNPO3Q9Y5L0 923 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-218ENST00000569569 ALOX12BO75342 701 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 CLEC3AO75596 197 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 WFS1O76024 890 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 PDGFAP04085 211 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 CYC1P08574 325 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF888P0CJ79 500 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 ACPPP15309 386 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 HPDP32754 393 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 HNF4AP41235 474 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 KLRB1Q12918 225 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 DEFB134Q4QY38 66 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 TOR1AIP1Q5JTV8 583 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 METTL2BQ6P1Q9 378 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 HPS6Q86YV9 775 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 TEX9Q8N6V9 391 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 TEX19Q8NA77 164 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 CCT6BQ92526 530 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 UBE2E3Q969T4 207 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 SMAD5Q99717 465 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 RHBGQ9H310 441 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 KLHL31Q9H511 634 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 C5AR2Q9P296 337 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 CPSF2Q9P2I0 782 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 ANAPC2Q9UJX6 822 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 TMCO1Q9UM00 188 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 ANGPTL3Q9Y5C1 460 aa13.06□□□□□ -0.32
HERPUD1-218ENST00000569569 LRIT2A6NDA9 550 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 ESPNB1AK53 854 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 MASP2O00187 686 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 CHST10O43529 356 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 SLC28A2O43868 658 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 JRKO75564 520 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 SLU7O95391 586 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 HPP00738 406 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 CD22P20273 847 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 ITGA3P26006 1051 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 RAB8AP61006 207 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 MINDY4Q4G0A6 757 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 FAAH2Q6GMR7 532 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 ATG14Q6ZNE5 492 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 PRICKLE2Q7Z3G6 844 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 OR5T3Q8NGG3 340 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 UBLCP1Q8WVY7 318 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 METTL21AQ8WXB1 218 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 GAL3ST3Q96A11 431 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 MRPL57Q9BQC6 102 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-218ENST00000569569 VN1R1Q9GZP7 353 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms