RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 POM121L1PQ3SYA9 428 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 ASTLQ6HA08 431 aaPredicted RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 C22orf39Q6P5X5 142 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 Q6ZVL8 140 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 GAREM2Q75VX8 874 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 HSD11B1LQ7Z5J1 315 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 NFKBIDQ8NI38 313 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 MCCC1Q96RQ3 725 aaPredicted RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 TCF25Q9BQ70 676 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 SH2B3Q9UQQ2 575 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 C5orf42Q9H799 3197 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 GABRB1P18505 474 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 ETV3P41162 512 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 CTSCP53634 463 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 RPS13P62277 151 aaKnown RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 SNRPD1P62314 119 aaKnown RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 SF3B4Q15427 424 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■■■■■ 31.2
PKD1-235ENST00000568591 AGTRAPQ6RW13 159 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 DEFB128Q7Z7B8 93 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 OR4C15Q8NGM1 316 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 FKBP14Q9NWM8 211 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 MS4A12Q9NXJ0 267 aa17.61■□□□□ 0.41
PKD1-235ENST00000568591 STOX2Q9P2F5 926 aaPredicted RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 CFAP20Q9Y6A4 193 aaKnown RBP17.61■□□□□ 0.41
PKD1-235ENST00000568591 C6orf47O95873 294 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 MPC1LP0DKB6 136 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 PCGF2P35227 344 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 HNRNPFP52597 415 aaKnown RBP17.6■□□□□ 0.41
PKD1-235ENST00000568591 PRSS53Q2L4Q9 553 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 LIPJQ5W064 366 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 CYP4Z2PQ8N1L4 340 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 METTL4Q8N3J2 472 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 STX19Q8N4C7 294 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 CELF2-AS1Q8N7Q2 184 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 C11orf65Q8NCR3 313 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 OR7G3Q8NG95 312 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 FADS2P1A8MWK0 482 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 TSPAN6O43657 245 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 PRMT3O60678 531 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 GABRR2P28476 465 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 UGT2B10P36537 528 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 RGS6P49758 472 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 AP1S2P56377 157 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 USP43Q70EL4 1123 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 MMP21Q8N119 569 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 B3GNT7Q8NFL0 401 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 MYDGFQ969H8 173 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 DOCK6Q96HP0 2047 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 CORO1BQ9BR76 489 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 KLHL42Q9P2K6 505 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 MAP4K5Q9Y4K4 846 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 INSL5Q9Y5Q6 135 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 SNX8Q9Y5X2 465 aa17.6■□□□□ 0.41
PKD1-235ENST00000568591 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 MGAT4DA6NG13 374 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 SNPHO15079 494 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PRAMEF10O60809 474 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 RPLP0P05388 317 aaKnown RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 ZNF8P17098 575 aaPredicted RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 PDHA2P29803 388 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 TUBA1BP68363 451 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 CDC20Q12834 499 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 MPEG1Q2M385 716 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PLEKHS1Q5SXH7 462 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 LHX8Q68G74 356 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 TTC23LQ6PF05 361 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 TUBA1AQ71U36 451 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 FAM217AQ8IXS0 508 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 STARD8Q92502 1023 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 NEIL2Q969S2 332 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 MTG2Q9H4K7 406 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 C14orf119Q9NWQ9 140 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 IFT52Q9Y366 437 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 SERTM1A2A2V5 107 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PSMD11O00231 422 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 MRPS14O60783 128 aaKnown RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 AOC2O75106 756 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 OLFM2O95897 454 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PBLDP30039 288 aaPredicted RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 SP140Q13342 867 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 C10orf62Q5T681 223 aaPredicted RBP17.59■□□□□ 0.41
PKD1-235ENST00000568591 ZNF605Q86T29 641 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 LACC1Q8IV20 430 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 FIBINQ8TAL6 211 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 CPNE5Q9HCH3 593 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PLCXD1Q9NUJ7 323 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 BTNL2Q9UIR0 455 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 PCDHGA3Q9Y5H0 932 aa17.59■□□□□ 0.41
PKD1-235ENST00000568591 EIF3FO00303 357 aaPredicted RBP17.58■□□□□ 0.41
PKD1-235ENST00000568591 CTDSP2O14595 271 aa17.58■□□□□ 0.41
PKD1-235ENST00000568591 LATS1O95835 1130 aa17.58■□□□□ 0.41
PKD1-235ENST00000568591 IMPA1P29218 277 aa17.58■□□□□ 0.41
PKD1-235ENST00000568591 MED22Q15528 200 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms