RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 NME2P22392 152 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 CDKN2DP55273 166 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 DEFB134Q4QY38 66 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 OR4K1Q8NGD4 311 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 TBC1D20Q96BZ9 403 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 ENKD1Q9H0I2 346 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 PARVBQ9HBI1 364 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 TRMT6Q9UJA5 497 aaKnown RBP21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 MAD1L1Q9Y6D9 718 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 COMMD10Q9Y6G5 202 aa21.48■■□□□ 1.03
CNEP1R1-209ENST00000567712 EIF3FO00303 357 aaPredicted RBP21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 NDUFS4O43181 175 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 B4GALT2O60909 372 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 SLC35G6P0C7Q6 338 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 SSTR2P30874 369 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 MLF1P58340 268 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 DHX9Q08211 1270 aaKnown RBP21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 CATSPEREQ5SY80 951 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 LGI4Q8N135 537 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 GHDCQ8N2G8 530 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 NFAM1Q8NET5 270 aaPredicted RBP21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 ABHD11Q8NFV4 315 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 SARGQ9BW04 601 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 GPAMQ9HCL2 828 aa21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 XAB2Q9HCS7 855 aaKnown RBP21.47■■□□□ 1.03
CNEP1R1-209ENST00000567712 MTORP42345 2549 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 OR1F1O43749 312 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 MLYCDO95822 493 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 TSPAN12O95859 305 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 C8GP07360 202 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 ZNF888P0CJ79 500 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 RFC3P40938 356 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 NR0B1P51843 470 aaKnown RBP21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 TAS2R50P59544 299 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 HERC3Q15034 1050 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 CEP97Q8IW35 865 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 MARVELD2Q8N4S9 558 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 C2CD4AQ8NCU7 369 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 C14orf79Q96F83 325 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 MS4A14Q96JA4 679 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 SPOCK3Q9BQ16 436 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 TRIM45Q9H8W5 580 aaPredicted RBP21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 HOMER3Q9NSC5 361 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 SLC17A6Q9P2U8 582 aa21.46■■□□□ 1.03
CNEP1R1-209ENST00000567712 C4orf51C9J302 202 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 E9PLN8 166 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 BANF1O75531 89 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 ZNF24P17028 368 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 ALOX12P18054 663 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 MAOAP21397 527 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 IL10P22301 178 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 ITGA8P53708 1063 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 LMNTD2Q8IXW0 634 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 CYP4X1Q8N118 509 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 NAT8LQ8N9F0 302 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 FAM98AQ8NCA5 519 aaKnown RBP21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 OR56A3Q8NH54 315 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 UTP15Q8TED0 518 aaKnown RBP21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 PHF10Q8WUB8 498 aaKnown RBP21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 SDCCAG3Q96C92 435 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 LINGO1Q96FE5 620 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 SNF8Q96H20 258 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 PTCHD1Q96NR3 888 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 TREX2Q9BQ50 279 aaPredicted RBP21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 VKORC1Q9BQB6 163 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 AICDAQ9GZX7 198 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 NECTIN3Q9NQS3 549 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 IKZF3Q9UKT9 509 aa21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 PHF3Q92576 2039 aaKnown RBP21.45■■□□□ 1.02
CNEP1R1-209ENST00000567712 A8MUA0 341 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 SERPIND1P05546 499 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 GRK3P35626 688 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 CCR8P51685 355 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 TLE4Q04727 773 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 HYAL2Q12891 473 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 SP140Q13342 867 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 ZNF662Q6ZS27 426 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 HORMAD2Q8N7B1 307 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 CALML6Q8TD86 181 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 MAGOHBQ96A72 148 aaKnown RBP21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 OLFM1Q99784 485 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 FAM129AQ9BZQ8 928 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 KLHL31Q9H511 634 aa21.44■■□□□ 1.02
CNEP1R1-209ENST00000567712 IGKV3D-11A0A0A0MRZ8 115 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 TRBC2A0A5B9 178 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 SLC16A5O15375 505 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 CCND1P24385 295 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 TRHRP34981 398 aaPredicted RBP21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 CYB561P49447 251 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 PWP1Q13610 501 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 UGT3A1Q6NUS8 523 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 MEX3BQ6ZN04 569 aaKnown RBP21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 SULF2Q8IWU5 870 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 ANKRD53Q8N9V6 530 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 NT5CQ8TCD5 201 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 NEIL2Q969S2 332 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 HAUS8Q9BT25 410 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 FAM167BQ9BTA0 163 aa21.43■■□□□ 1.02
CNEP1R1-209ENST00000567712 PPT2Q9UMR5 302 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms