RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 JUNP05412 331 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 BCKDHAP12694 445 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 PNLIPRP1P54315 467 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 SLBPQ14493 270 aaKnown RBP eCLIP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZMYND11Q15326 602 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 FBXO42Q6P3S6 717 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 LRRN1Q6UXK5 716 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 TMED4Q7Z7H5 227 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 RANBP3LQ86VV4 465 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 DCP2Q8IU60 420 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 RPLP0P6Q8NHW5 317 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 DNAJA4Q8WW22 397 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CAMK1GQ96NX5 476 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 TTPALQ9BTX7 342 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 SPATA9Q9BWV2 254 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 GPN2Q9H9Y4 310 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 SDR39U1Q9NRG7 319 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MGAT4AQ9UM21 535 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MYO18AQ92614 2054 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 PRODHO43272 600 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MTX2O75431 263 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 SLC25A12O75746 678 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 FOSL2P15408 326 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZNF33AQ06730 810 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ULK3Q6PHR2 472 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 PAQR7Q86WK9 346 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 NXPE1Q8N323 547 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CCDC120Q96HB5 630 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CD244Q9BZW8 370 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MKRN2Q9H000 416 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 TRAV19A0A0A6YYK7 116 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 A0A1W2PQL4 384 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ARL5CA6NH57 179 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 KLK1P06870 262 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MLLT10P55197 1068 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ABRAXAS2Q15018 415 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR4D1Q15615 310 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZNF630Q2M218 657 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 TMEM220Q6QAJ8 160 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 PAMR1Q6UXH9 720 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 AGMOQ6ZNB7 445 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 LRRC70Q7Z2Q7 622 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 DNAJB7Q7Z6W7 309 aaPredicted RBP12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ISCA2Q86U28 154 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 LHFPL3Q86UP9 236 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CCDC107Q8WV48 283 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 ASB15Q8WXK1 588 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CMTM7Q96FZ5 175 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 STRA6Q9BX79 667 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 BTBD1Q9H0C5 482 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 FOLH1BQ9HBA9 442 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 CALML5Q9NZT1 146 aa12□□□□□ -0.49
CSPG4P13-202ENST00000567704 MEIOCA2RUB1 952 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 CLCA1A8K7I4 914 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 CAPN5O15484 640 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 NUPL2O15504 423 aaKnown RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR1I1O60431 355 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 ARL6IP5O75915 188 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 SCGNO76038 276 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 C6orf47O95873 294 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 FPGSQ05932 587 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 CHRNA6Q15825 494 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 GTDC1Q4AE62 458 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 POMZP3Q6PJE2 187 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZFP41Q8N8Y5 198 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 CHDHQ8NE62 594 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 TOR1AIP2Q8NFQ8 470 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 PPP1R16AQ96I34 528 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 MRGPRX2Q96LB1 330 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 MCCC1Q96RQ3 725 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 SMOQ99835 787 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 NDC1Q9BTX1 674 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 DOHHQ9BU89 302 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 MYO10Q9HD67 2058 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 EDARQ9UNE0 448 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 MATN4O95460 622 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 ALPPP05187 535 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 RB1P06400 928 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 RBM34P42696 430 aaKnown RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 BTG3Q14201 252 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 PCBP2Q15366 365 aaKnown RBP eCLIP11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 NTRK2Q16620 822 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 RNF130Q86XS8 419 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 ARFGAP1Q8N6T3 406 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 MGAT4BQ9UQ53 548 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 DISC1C4P0D8 188 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 LRRN3E7EW58 273 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 SKP1P63208 163 aa11.99□□□□□ -0.49
CSPG4P13-202ENST00000567704 BCL7AQ4VC05 210 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms