RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CLECL1Q8IZS7 167 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 TRAM1L1Q8N609 369 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 WFIKKN2Q8TEU8 576 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ZFP90Q8TF47 636 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 PSD2Q9BQI7 771 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 DOHHQ9BU89 302 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ATG10Q9H0Y0 220 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 FAM83DQ9H4H8 585 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ZDHHC6Q9H6R6 413 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 SLCO3A1Q9UIG8 710 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 DAPK2Q9UIK4 370 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 FZD4Q9ULV1 537 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 SLC27A6Q9Y2P4 619 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 PLXNA2O75051 1894 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ADAMDEC1O15204 470 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 SRPRAP08240 638 aaKnown RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 IL1RL1Q01638 556 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 SEMG2Q02383 582 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 LAPTM4AQ15012 233 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 RGNQ15493 299 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 SERPINA13PQ6UXR4 307 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CCDC71Q8IV32 467 aaPredicted RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 C11orf65Q8NCR3 313 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 OR56A3Q8NH54 315 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 GOT1L1Q8NHS2 421 aaPredicted RBP16.13■□□□□ 0.17
CMTM3-213ENST00000566756 NDNFQ8TB73 568 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 CHTF18Q8WVB6 975 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 DACH2Q96NX9 599 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 ABCG8Q9H221 673 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 OSGIN1Q9UJX0 560 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 VPS4AQ9UN37 437 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 A3GALT2U3KPV4 340 aa16.13■□□□□ 0.17
CMTM3-213ENST00000566756 DOCK8Q8NF50 2099 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 GABRR3A8MPY1 467 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 AXIN1O15169 862 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 FADS2O95864 444 aaKnown RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 TGFBR2P37173 567 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 NNMTP40261 264 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 VIPR2P41587 438 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 RPS3AP61247 264 aaKnown RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 RAE1P78406 368 aaKnown RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 RBBP4Q09028 425 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ELP6Q0PNE2 266 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 TBCEQ15813 527 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 CYP2A13Q16696 494 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 AGTRAPQ6RW13 159 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ENTHD1Q8IYW4 607 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 APH1BQ8WW43 257 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 SLC38A4Q969I6 547 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 SH3KBP1Q96B97 665 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 TAMM41Q96BW9 452 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 LGALS12Q96DT0 336 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 MRGPRX3Q96LB0 322 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ZSCAN5AQ9BUG6 496 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 BTBD2Q9BX70 525 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ITPAQ9BY32 194 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 BHLHE41Q9C0J9 482 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 STOX2Q9P2F5 926 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-213ENST00000566756 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 PCDHGA6Q9Y5G7 932 aa16.12■□□□□ 0.17
CMTM3-213ENST00000566756 TSPAN11A1L157 253 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 E7EQ34 232 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 YY2O15391 372 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 PCDHGA12O60330 932 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 DIRAS1O95057 198 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 NFATC1O95644 943 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 CATP04040 527 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 IDSP22304 550 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 DGKGP49619 791 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 CCR3P51677 355 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 CRYBA2P53672 197 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 SELENOWP63302 87 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 TUBA3EQ6PEY2 450 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 CCDC81Q6ZN84 652 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 TRIM74Q86UV6 250 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 TRIM73Q86UV7 250 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 NAT16Q8N8M0 369 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 REPS1Q96D71 796 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 ABHD8Q96I13 439 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 VPS35Q96QK1 796 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 SLIRPQ9GZT3 109 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 SGK2Q9HBY8 427 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 PCDH12Q9NPG4 1184 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 FKBP14Q9NWM8 211 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 PAIP2BQ9ULR5 123 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 BTBD3Q9Y2F9 522 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 PMF1-BGLAPU3KQ54 211 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 C1QCP02747 245 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 ANXA8P13928 327 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 CD40LGP29965 261 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 GGT2P36268 569 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 MAGEA8P43361 318 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 VBP1P61758 197 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 INAQ16352 499 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 HENMT1Q5T8I9 393 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 FAM124AQ86V42 546 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 LACC1Q8IV20 430 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms