RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ASCL3Q9NQ33 180 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 DMRT3Q9NQL9 472 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 THSD1Q9NS62 852 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 CUTCQ9NTM9 273 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 TXLNGQ9NUQ3 528 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 ANGPTL2Q9UKU9 493 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 ZNF490Q9ULM2 529 aaPredicted RBP10.93□□□□□ -0.66
KARS-207ENST00000566560 SNX6Q9UNH7 406 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 FIS1Q9Y3D6 152 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
KARS-207ENST00000566560 HYKKA2RU49 373 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 CDRT15L2A8MXV6 281 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 STK17BO94768 372 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SERPINA6P08185 405 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 HBQ1P09105 142 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ZNF28P17035 718 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 CD82P27701 267 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SLC5A2P31639 672 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 PIK3CBP42338 1070 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SLC1A6P48664 564 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 HTR6P50406 440 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ARSFP54793 590 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 FOXA1P55317 472 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ABCE1P61221 599 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 STXBP1P61764 594 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 STX3Q13277 289 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 NDUFA9Q16795 377 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 MUM1Q2TAK8 710 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SGO1Q5FBB7 561 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 TOR1AIP1Q5JTV8 583 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SH2D4BQ5SQS7 431 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 GARNL3Q5VVW2 1013 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ATG16L1Q676U5 607 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 CLEC6AQ6EIG7 209 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 TMEM214Q6NUQ4 689 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 RNF175Q8N4F7 328 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 KCT2Q8NC54 265 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 FAM76AQ8TAV0 307 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 WDR20Q8TBZ3 569 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 LRRC8CQ8TDW0 803 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 CREB3L4Q8TEY5 395 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ZNF473Q8WTR7 871 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 SELENOMQ8WWX9 145 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 CLIP3Q96DZ5 547 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 TM4SF19Q96DZ7 209 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 HBEGFQ99075 208 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 MTERF1Q99551 399 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 MS4A8Q9BY19 250 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 MANSC1Q9H8J5 431 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 TNFRSF12AQ9NP84 129 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 ENAMQ9NRM1 1142 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 DHCR7Q9UBM7 475 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 ADGRE2Q9UHX3 823 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 MRPS2Q9Y399 296 aaKnown RBP10.92□□□□□ -0.66
KARS-207ENST00000566560 TSC22D4Q9Y3Q8 395 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 TIMM22Q9Y584 194 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 SEC16AO15027 2179 aa10.92□□□□□ -0.66
KARS-207ENST00000566560 APC2O95996 2303 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 A0A1B0GX78 115 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 URADA6NGE7 173 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 MAGEB17A8MXT2 336 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 TMEM233B4DJY2 109 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 STMND1H3BQB6 276 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 J3QL48 77 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 MANBAO00462 879 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 DSCR3O14972 297 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 AZIN1O14977 448 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 ITM2AO43736 263 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 SH3BGRLO75368 114 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 SNUPNO95149 360 aaKnown RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 DLGAP3O95886 979 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 CHEK2O96017 543 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 NTRK1P04629 796 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 ZNF888P0CJ79 500 aaPredicted RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 UROSP10746 265 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 IL1RNP18510 177 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 HNRNPH1P31943 449 aaKnown RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 NEK2P51955 445 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 RPS13P62277 151 aaKnown RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 HYAL2Q12891 473 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 FAM214AQ32MH5 1076 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 TBC1D25Q3MII6 688 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 C1orf189Q5VU69 101 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 KANK2Q63ZY3 851 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 RHBDD2Q6NTF9 364 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 TTLL10Q6ZVT0 673 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 ABHD13Q7L211 337 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 ARHGEF39Q8N4T4 335 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 METTL27Q8N6F8 245 aaPredicted RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 GALNT6Q8NCL4 622 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 PROKR1Q8TCW9 393 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 GAL3ST3Q96A11 431 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 ZNF578Q96N58 590 aaPredicted RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 SORT1Q99523 831 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 CENPKQ9BS16 269 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 NDOR1Q9UHB4 597 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 TMEM184BQ9Y519 407 aaPredicted RBP10.91□□□□□ -0.66
KARS-207ENST00000566560 IGF2RP11717 2491 aa10.91□□□□□ -0.66
KARS-207ENST00000566560 SCN3AQ9NY46 2000 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms