RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NEMFO60524 1076 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NDUFS7O75251 213 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PDE9AO76083 593 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PIGNO95427 931 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CALCAP01258 141 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CSF2P04141 144 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 S100A9P06702 114 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CHRM5P08912 532 aaPredicted RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 STAG3L3P0CL85 134 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CEACAM1P13688 526 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CCDC130P13994 396 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CHRNB2P17787 502 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 DGKAP23743 735 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 GJB2P29033 226 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CHI3L1P36222 383 aaPredicted RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PLA2G5P39877 138 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 TNFRSF4P43489 277 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PDX1P52945 283 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 LIMK2P53671 638 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 RAD23BP54727 409 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CARD18P57730 90 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CBX1P83916 185 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CACNG1Q06432 222 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SRSF5Q13243 272 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SQLEQ14534 574 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 STX1AQ16623 288 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 KIF19Q2TAC6 998 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC9C1Q4G0N8 1177 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 ARMC12Q5T9G4 340 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 GRTP1Q5TC63 336 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 AADACL4Q5VUY2 407 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 FUT10Q6P4F1 479 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CTR9Q6PD62 1173 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 METAP1DQ6UB28 335 aaPredicted RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CD164L2Q6UWJ8 174 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 RAD9BQ6WBX8 426 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 MON1BQ7L1V2 547 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF367Q7RTV3 350 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 ZDHHC17Q8IUH5 632 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 C1orf210Q8IVY1 113 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 GBGT1Q8N5D6 347 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 KLHDC1Q8N7A1 406 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NECAB1Q8N987 351 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 LMNTD1Q8N9Z9 388 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SIDT2Q8NBJ9 832 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 TRPV3Q8NET8 790 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 RDM1Q8NG50 284 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 OR11H4Q8NGC9 324 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 OR13J1Q8NGT2 312 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 OR5R1Q8NH85 324 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 MIPOL1Q8TD10 442 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 ATP8B4Q8TF62 1192 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 RLN3Q8WXF3 142 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 INPP5DQ92835 1189 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 EXTL1Q92935 676 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PEX13Q92968 403 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NT5C3BQ969T7 300 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 REPS1Q96D71 796 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 IFT74Q96LB3 600 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 SENP8Q96LD8 212 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 BBC3Q96PG8 261 aaPredicted RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PLEKHG4BQ96PX9 1271 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NPAS2Q99743 824 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CCDC3Q9BQI4 270 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 MLST8Q9BVC4 326 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 LRRC2Q9BYS8 371 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 MAGT1Q9H0U3 335 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 MTIF3Q9H2K0 278 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 DPEP2Q9H4A9 486 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 Q9H8V8 135 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 CALHM2Q9HA72 323 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NOX4Q9NPH5 578 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 THSD1Q9NS62 852 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 TMEM45AQ9NWC5 275 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 GDAP2Q9NXN4 497 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 DAPK2Q9UIK4 370 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 FOXJ3Q9UPW0 622 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 DLGAP4Q9Y2H0 992 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 NME7Q9Y5B8 376 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PIK3R4Q99570 1358 aa3.11□□□□□ -1.91
HERPUD1-211ENST00000566550 PTPRMP28827 1452 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 EIF4G3O43432 1585 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TRAV18A0A075B6X5 111 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 hDV102S1A0JD36 115 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ASB14A6NK59 587 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ANKRD66B4E2M5 251 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 M0R296 226 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 WRBO00258 174 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PDXKO00764 312 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CASC3O15234 703 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 LRRTM2O43300 516 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SCO2O43819 266 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CACNG3O60359 315 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NME2P1O60361 137 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 RAMP2O60895 175 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SNNO75324 88 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 WBP4O75554 376 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 GRAP2O75791 330 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms