RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NKAPQ8N5F7 415 aaKnown RBP17.23■□□□□ 0.35
USB1-213ENST00000566292 TBC1D19Q8N5T2 526 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ANKRD49Q8WVL7 239 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ANKRD7Q92527 254 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ZNF354BQ96LW1 612 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 MCMBPQ9BTE3 642 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 SLC6A16Q9GZN6 736 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 PELI2Q9HAT8 420 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 MMP25Q9NPA2 562 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 SMYD2Q9NRG4 433 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 ABI3Q9P2A4 366 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 SLC22A14Q9Y267 594 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 SNX24Q9Y343 169 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 DYRK1BQ9Y463 629 aa17.23■□□□□ 0.35
USB1-213ENST00000566292 C4orf51C9J302 202 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 ZG16O60844 167 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 PIAS1O75925 651 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 PER3P56645 1201 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 MRPS25P82663 173 aaKnown RBP17.22■□□□□ 0.35
USB1-213ENST00000566292 CDKL1Q00532 357 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 PMP22Q01453 160 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 CBLBQ13191 982 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 C18orf21Q32NC0 220 aaPredicted RBP17.22■□□□□ 0.35
USB1-213ENST00000566292 ZNF766Q5HY98 468 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 C1QL3Q5VWW1 255 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 NXPE4Q6UWF7 544 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 FJX1Q86VR8 437 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 SUN3Q8TAQ9 357 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 TBC1D20Q96BZ9 403 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 KRT12Q99456 494 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 LPAR4Q99677 370 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 AICDAQ9GZX7 198 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 KLHL31Q9H511 634 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 OARD1Q9Y530 152 aa17.22■□□□□ 0.35
USB1-213ENST00000566292 WISP2O76076 250 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 SMIM10L1P0DMW3 83 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 HNF4AP41235 474 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 OR4D2P58180 307 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 RAB8AP61006 207 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
USB1-213ENST00000566292 TUBA3CQ13748 450 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 TSNQ15631 228 aaKnown RBP17.21■□□□□ 0.35
USB1-213ENST00000566292 ZRSR2Q15696 482 aaKnown RBP17.21■□□□□ 0.35
USB1-213ENST00000566292 MEP1AQ16819 746 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 TUBA3EQ6PEY2 450 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 GFRALQ6UXV0 394 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 ABHD13Q7L211 337 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 LURAP1LQ8IV03 231 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 ZBED8Q8IZ13 594 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 MDS2Q8NDY4 140 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 CREB3L4Q8TEY5 395 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 SMIM10Q96HG1 83 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 VPS39Q96JC1 886 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 SIGLEC12Q96PQ1 595 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 EGFL8Q99944 293 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 AIF1LQ9BQI0 150 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 RHOJQ9H4E5 214 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 KCNE2Q9Y6J6 123 aa17.21■□□□□ 0.35
USB1-213ENST00000566292 A0A1B0GUH1 482 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 B4GALT2O60909 372 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 WISP3O95389 354 aaPredicted RBP17.2■□□□□ 0.34
USB1-213ENST00000566292 CRYABP02511 175 aaKnown RBP17.2■□□□□ 0.34
USB1-213ENST00000566292 JAK1P23458 1154 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 GDF5P43026 501 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 SLC26A5P58743 744 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 SKP1P63208 163 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 BTG2P78543 158 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 RBBP5Q15291 538 aaKnown RBP17.2■□□□□ 0.34
USB1-213ENST00000566292 NIPAL1Q6NVV3 410 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 CAPN12Q6ZSI9 719 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 TRPV3Q8NET8 790 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 RELTQ969Z4 430 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 RHBDF1Q96CC6 855 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 HES7Q9BYE0 225 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 UNKQ9C0B0 810 aaKnown RBP17.2■□□□□ 0.34
USB1-213ENST00000566292 ANKRD10Q9NXR5 420 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 NSMCE4AQ9NXX6 385 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 CTNNAL1Q9UBT7 734 aa17.2■□□□□ 0.34
USB1-213ENST00000566292 CXorf49A8MYA2 514 aaPredicted RBP17.19■□□□□ 0.34
USB1-213ENST00000566292 UNC5CO95185 931 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 MYBL2P10244 700 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 CD96P40200 585 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 SLC6A12P48065 614 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 HNMTP50135 292 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 QSOX2Q6ZRP7 698 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 ADAMTSL2Q86TH1 951 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 KLHDC8AQ8IYD2 350 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 KIF2BQ8N4N8 673 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 ELP5Q8TE02 316 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 PTCHD1Q96NR3 888 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 CAB39LQ9H9S4 337 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 GPAMQ9HCL2 828 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 RNF14Q9UBS8 474 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 SEC14L3Q9UDX4 400 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 MTO1Q9Y2Z2 717 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms