RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DXOO77932 396 aaKnown RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 CTSBP07858 339 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 RPSAP08865 295 aaKnown RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 TSPAN8P19075 237 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ARRB2P32121 409 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ETV5P41161 510 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 RAB15P59190 212 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 KLC1Q07866 573 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 HYAL2Q12891 473 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 FOXC1Q12948 553 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 TUBB3Q13509 450 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PWP1Q13610 501 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SLBPQ14493 270 aaKnown RBP eCLIP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PRTGQ2VWP7 1150 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ARL13AQ5H913 290 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 C10orf62Q5T681 223 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 LETMD1Q6P1Q0 360 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 MED27Q6P2C8 311 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SYVN1Q86TM6 617 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PLD3Q8IV08 490 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 KIRREL3Q8IZU9 778 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 TBC1D19Q8N5T2 526 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 TTLQ8NG68 377 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 OR7G3Q8NG95 312 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 OR1L3Q8NH93 324 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PPP1R14CQ8TAE6 165 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 WDR20Q8TBZ3 569 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 NT5CQ8TCD5 201 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SCNM1Q9BWG6 230 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ASPSCR1Q9BZE9 553 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 C20orf27Q9GZN8 174 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 NMUR2Q9GZQ4 415 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SPRTNQ9H040 489 aaPredicted RBP12.04□□□□□ -0.48
SF3B3-206ENST00000565990 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 RARRES3Q9UL19 164 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PPT2Q9UMR5 302 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 MSRB2Q9Y3D2 182 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHGA11Q9Y5H2 935 aa12.04□□□□□ -0.48
SF3B3-206ENST00000565990 SEC16AO15027 2179 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 SERTM1A2A2V5 107 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CDRT15L2A8MXV6 281 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 TMEM150CB9EJG8 249 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 C9orf172C9J069 976 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CLEC3AO75596 197 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 TBX6O95947 436 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 HGFP14210 728 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 ITIH1P19827 911 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 SERPINB1P30740 379 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 PIK3CBP42338 1070 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CCR10P46092 362 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 ABCE1P61221 599 aaKnown RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 AP2B1P63010 937 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 SHC2P98077 582 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF33BQ06732 778 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 FOXM1Q08050 763 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 RCN2Q14257 317 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 RBBP7Q16576 425 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CPSF6Q16630 551 aaKnown RBP eCLIP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 MUM1Q2TAK8 710 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 UGT3A2Q3SY77 523 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 DCAF12Q5T6F0 453 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 YOD1Q5VVQ6 348 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CEACAM20Q6UY09 585 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 GPRIN3Q6ZVF9 776 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 VN1R5Q7Z5H4 357 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 PPP1R3BQ86XI6 285 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 SCUBE1Q8IWY4 988 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 TRPV3Q8NET8 790 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 SLC13A3Q8WWT9 602 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 CMTM5Q96DZ9 223 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 TEFMQ96QE5 360 aaKnown RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 NR1H4Q96RI1 486 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 MID1IP1Q9NPA3 183 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 NKX1-2Q9UD57 310 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-206ENST00000565990 KLK13Q9UKR3 277 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
SF3B3-206ENST00000565990 AKAP13Q12802 2813 aa12.02□□□□□ -0.48
SF3B3-206ENST00000565990 CACNA1AO00555 2505 aa12.02□□□□□ -0.48
SF3B3-206ENST00000565990 GOLGA8QA0A0J9YX86 632 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 HYKKA2RU49 373 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 GOLGA8OA6NCC3 632 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 LRIT2A6NDA9 550 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 B2RBV5 119 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 GOLGA8NF8WBI6 632 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SLCO1B7G3V0H7 640 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 FOXE1O00358 373 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ZSCAN9O15535 394 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ITM2AO43736 263 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 OR2B3O76000 313 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 OR4F21O95013 312 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms