RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 C9orf172C9J069 976 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 POLR1CO15160 346 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 POLR3GO15318 223 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 ZSCAN9O15535 394 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TGFB1P01137 390 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 KRT6AP02538 564 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 KRT6BP04259 564 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 PRB1P04280 392 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SERPIND1P05546 499 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 JMJD7P0C870 316 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SMIM10L1P0DMW3 83 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SERPINB1P30740 379 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 KRT6CP48668 564 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 IFT88Q13099 833 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TCTE1Q5JU00 501 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 MANEAQ5SRI9 462 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 C10orf62Q5T681 223 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TMEM214Q6NUQ4 689 aaKnown RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 FOXR1Q6PIV2 292 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 UBE3DQ7Z6J8 389 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 BPHLQ86WA6 291 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF655Q8N720 491 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SLC38A9Q8NBW4 561 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 CAMKVQ8NCB2 501 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TWIST2Q8WVJ9 160 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SELENOMQ8WWX9 145 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 N4BP2L2Q92802 583 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 RNF31Q96EP0 1072 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SMIM10Q96HG1 83 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 F2RL3Q96RI0 385 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 TAAR9Q96RI9 348 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
CFDP1-205ENST00000565646 OR51B5Q9H339 312 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 ELOVL6Q9H5J4 265 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 FANCEQ9HB96 536 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 PSD3Q9NYI0 1048 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 SERTAD3Q9UJW9 196 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 PCDHGA8Q9Y5G5 932 aa12.13□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF195O14628 629 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF749O43361 778 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 EDF1O60869 148 aaKnown RBP12.12□□□□□ -0.47
CFDP1-205ENST00000565646 SH3BGRLO75368 114 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ULK1O75385 1050 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 CRCPO75575 148 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 B3GALT4O96024 378 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 SLC35G6P0C7Q6 338 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF28P17035 718 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 MAPK10P53779 464 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 EMP3P54852 163 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 RAB15P59190 212 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 BTKQ06187 659 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF33BQ06732 778 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 RGS1Q08116 209 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 GRM7Q14831 915 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
CFDP1-205ENST00000565646 TOR1AIP1Q5JTV8 583 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 DEPDC1Q5TB30 811 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 TLDC1Q6P9B6 456 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 Q6ZSR9 355 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 PRSS41Q7RTY9 318 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 MAVSQ7Z434 540 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 PPP1R3BQ86XI6 285 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 GPR135Q8IZ08 494 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 CCT6BQ92526 530 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 COL26A1Q96A83 441 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF317Q96PQ6 595 aaPredicted RBP12.12□□□□□ -0.47
CFDP1-205ENST00000565646 DDA1Q9BW61 102 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 ACPTQ9BZG2 426 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 SPRY4Q9C004 299 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 POLR1BQ9H9Y6 1135 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 BRF2Q9HAW0 419 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 MARCOQ9UEW3 520 aaPredicted RBP12.12□□□□□ -0.47
CFDP1-205ENST00000565646 PCDHGA3Q9Y5H0 932 aa12.12□□□□□ -0.47
CFDP1-205ENST00000565646 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
CFDP1-205ENST00000565646 CROCCQ5TZA2 2017 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 HYKKA2RU49 373 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 TXNDC9O14530 226 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 PIP5K1BO14986 540 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 FOXS1O43638 330 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-205ENST00000565646 TNFSF15O95150 251 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 LINC00032P0C843 101 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 ZNF888P0CJ79 500 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-205ENST00000565646 KITP10721 976 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 HSD3B1P14060 373 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 ITGAXP20702 1163 aa12.11□□□□□ -0.47
CFDP1-205ENST00000565646 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-205ENST00000565646 HSD3B2P26439 372 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms