RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 VPS4BO75351 444 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 SERPINA6P08185 405 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 ZNF888P0CJ79 500 aaPredicted RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 ICAM2P13598 275 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 GGT5P36269 586 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 GDF5P43026 501 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 SERPINB9P50453 376 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 MLLT10P55197 1068 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 LAPTM5Q13571 262 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 TMIGD1Q6UXZ0 262 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 RIPOR1Q6ZS17 1223 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 AFAP1L2Q8N4X5 818 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 MIB2Q96AX9 1013 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 PEX11GQ96HA9 241 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 FAR2Q96K12 515 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 EFCAB11Q9BUY7 163 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 RBCK1Q9BYM8 510 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 SLC6A16Q9GZN6 736 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 SPNS1Q9H2V7 528 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 CLK4Q9HAZ1 481 aaKnown RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 SNX15Q9NRS6 342 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 OPTCQ9UBM4 332 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 VPS4AQ9UN37 437 aa11.62□□□□□ -0.55
SPG7-211ENST00000565370 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
SPG7-211ENST00000565370 A0A087WUV0 522 aaPredicted RBP11.61□□□□□ -0.55
SPG7-211ENST00000565370 LOC102723996A0A087X1L8 192 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ANKDD1BA6NHY2 528 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 MASP2O00187 686 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 KRT38O76015 456 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 SERPINA7P05543 415 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 PRR35P0CG20 571 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 GFAPP14136 432 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 CNTFP26441 200 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 TYK2P29597 1187 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 SRSF1Q07955 248 aaKnown RBP eCLIP11.61□□□□□ -0.559e-7■■□□□ 11.4
SPG7-211ENST00000565370 TGM3Q08188 693 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 HIST2H2ACQ16777 129 aaPredicted RBP11.61□□□□□ -0.55
SPG7-211ENST00000565370 C18orf21Q32NC0 220 aaPredicted RBP11.61□□□□□ -0.55
SPG7-211ENST00000565370 XKR6Q5GH73 641 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 CRB2Q5IJ48 1285 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 TOR1AIP1Q5JTV8 583 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 HIST2H2AA3Q6FI13 130 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 TMEM205Q6UW68 189 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ISLR2Q6UXK2 745 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 SLCO4C1Q6ZQN7 724 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 LAPTM4BQ86VI4 370 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 PDSS2Q86YH6 399 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ANKRD53Q8N9V6 530 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 RHEBL1Q8TAI7 183 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ADAMTS18Q8TE60 1221 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 SLC44A1Q8WWI5 657 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 MOCOSQ96EN8 888 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 PTCD3Q96EY7 689 aaKnown RBP11.61□□□□□ -0.55
SPG7-211ENST00000565370 PAFAH2Q99487 392 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 FUT8Q9BYC5 575 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ZNF700Q9H0M5 742 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 NT5DC2Q9H857 520 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 COPS7BQ9H9Q2 264 aaPredicted RBP11.61□□□□□ -0.55
SPG7-211ENST00000565370 LUZP4Q9P127 313 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 TEKT2Q9UIF3 430 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 ANGPTL3Q9Y5C1 460 aa11.61□□□□□ -0.55
SPG7-211ENST00000565370 A0A096LPK6 155 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 DYTNA2CJ06 578 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 K7EPI3 171 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 TAPBPO15533 448 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 JRKO75564 520 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 CDC123O75794 336 aaPredicted RBP11.6□□□□□ -0.55
SPG7-211ENST00000565370 WFS1O76024 890 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 C2P06681 752 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 FHP07954 510 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 RNH1P13489 461 aaKnown RBP11.6□□□□□ -0.55
SPG7-211ENST00000565370 SERPINB1P30740 379 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 HNF4AP41235 474 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 PIK3CGP48736 1102 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 CD97P48960 835 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 RAB8AP61006 207 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 IRF8Q02556 426 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 MFAP5Q13361 173 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 ABRAXAS2Q15018 415 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 PCOLCEQ15113 449 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 EXT1Q16394 746 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 TRIM40Q6P9F5 258 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
SPG7-211ENST00000565370 CENPLQ8N0S6 344 aaPredicted RBP11.6□□□□□ -0.55
SPG7-211ENST00000565370 CNPY4Q8N129 248 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
SPG7-211ENST00000565370 TBC1D20Q96BZ9 403 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 CNDP1Q96KN2 507 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 CD244Q9BZW8 370 aa11.6□□□□□ -0.55
SPG7-211ENST00000565370 VPS11Q9H270 941 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms