RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 ESPL1Q14674 2120 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 IGHV1-45A0A0A0MS14 117 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 DNAJB6O75190 326 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SLC35E2BP0CK96 405 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 MSH2P43246 934 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SCTRP47872 440 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SERPINB9P50453 376 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SOX8P57073 446 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 RAB8AP61006 207 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 VSNL1P62760 191 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 REEP5Q00765 189 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 RGS1Q08116 209 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 BMPR2Q13873 1038 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 PCOLCEQ15113 449 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 TGFBIQ15582 683 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 DEFB134Q4QY38 66 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 MROH9Q5TGP6 573 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 NXPE4Q6UWF7 544 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 CCDC91Q7Z6B0 441 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 CUZD1Q86UP6 607 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 GPSM1Q86YR5 675 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SNX31Q8N9S9 440 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 OR4K1Q8NGD4 311 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 RHBDF1Q96CC6 855 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 SNRNP40Q96DI7 357 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 WDR77Q9BQA1 342 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 RHBGQ9H310 441 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 PELI2Q9HAT8 420 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 RIC8BQ9NVN3 520 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 ASF1BQ9NVP2 202 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 PLA2G3Q9NZ20 509 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
VPS9D1-204ENST00000565023 A0A0G2JN53 185 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 EXOC1LA0A1B0GW35 172 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 CLGNO14967 610 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 WFS1O76024 890 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ALDOAP04075 364 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 PRR35P0CG20 571 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ITGAMP11215 1152 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 CD1DP15813 335 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ALOX12P18054 663 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 CNTFP26441 200 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 HSPA7P48741 367 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ATP6V0D1P61421 351 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 CDKL1Q00532 357 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 OR4D1Q15615 310 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 B3GNTL1Q67FW5 361 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ISLR2Q6UXK2 745 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ANKRD53Q8N9V6 530 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 CATSPER1Q8NEC5 780 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ISL2Q96A47 359 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 TMEM79Q9BSE2 394 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 SNX15Q9NRS6 342 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 FETUBQ9UGM5 382 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ZFP69BQ9UJL9 534 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 RNF112Q9ULX5 631 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-204ENST00000565023 ANKRD17O75179 2603 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 A0A087X1B8 175 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TCP11X1B4DZS4 312 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TAPBPO15533 448 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 B4GALT2O60909 372 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 H2AFYO75367 372 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 KRT38O76015 456 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 C2P06681 752 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 GCAP28676 217 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 MAGEA12P43365 314 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 HNMTP50135 292 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 SERPINB8P50452 374 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ARG2P78540 354 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 DLG1Q12959 904 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 CDC16Q13042 620 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 MFAP5Q13361 173 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 HERC3Q15034 1050 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ERCC6LQ2NKX8 1250 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 EIF2S3LQ2VIR3 472 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 BTBD16Q32M84 506 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TMEM205Q6UW68 189 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 Q6ZS92 163 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TAOK1Q7L7X3 1001 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms