RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 H2AFYO75367 372 aaKnown RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 SERPIND1P05546 499 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 RNH1P13489 461 aaKnown RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 GNAZP19086 355 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 HPDP32754 393 aaPredicted RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 DCTP40126 519 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 OR4D2P58180 307 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 POU4F1Q01851 419 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 USP10Q14694 798 aaKnown RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 ZNF766Q5HY98 468 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 CDKL4Q5MAI5 379 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 TMEM207Q6UWW9 146 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 QSOX2Q6ZRP7 698 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 ANKMY2Q8IV38 441 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 FBXO36Q8NEA4 188 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 ARMC2Q8NEN0 867 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 UTP15Q8TED0 518 aaKnown RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 MOCOSQ96EN8 888 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 PWWP2AQ96N64 755 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 UTP23Q9BRU9 249 aaKnown RBP14.11□□□□□ -0.15
SPG7-210ENST00000564409 TRIM51Q9BSJ1 452 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 SLC6A16Q9GZN6 736 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 PSAT1Q9Y617 370 aa14.11□□□□□ -0.15
SPG7-210ENST00000564409 SYNDIG1LA6NDD5 238 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 PSMD12O00232 456 aaPredicted RBP14.1□□□□□ -0.15
SPG7-210ENST00000564409 TP73O15350 636 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 EIF3HO15372 352 aaKnown RBP eCLIP14.1□□□□□ -0.155e-6■■■□□ 14.9
SPG7-210ENST00000564409 PRMT3O60678 531 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 F10P00742 488 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 ZNF888P0CJ79 500 aaPredicted RBP14.1□□□□□ -0.15
SPG7-210ENST00000564409 SMIM10L1P0DMW3 83 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 CD46P15529 392 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SLC12A2P55011 1212 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SLC26A5P58743 744 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TAS2R39P59534 338 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 STXBP1P61764 594 aaKnown RBP14.1□□□□□ -0.15
SPG7-210ENST00000564409 GTF3C1Q12789 2109 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 KRTCAP3Q53RY4 240 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 CYS1Q717R9 158 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 CRLF3Q8IUI8 442 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 BEST3Q8N1M1 668 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TCAIMQ8N3R3 496 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TMEM178AQ8NBL3 297 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 MDS2Q8NDY4 140 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 OR5T3Q8NGG3 340 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 CDKL2Q92772 493 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TSPAN17Q96FV3 270 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SMIM10Q96HG1 83 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TSNARE1Q96NA8 513 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 EGFL8Q99944 293 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 DERL2Q9GZP9 239 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SUCOQ9UBS9 1254 aaKnown RBP14.1□□□□□ -0.15
SPG7-210ENST00000564409 CTNNAL1Q9UBT7 734 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SEC14L3Q9UDX4 400 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 SLC22A14Q9Y267 594 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 CROCCQ5TZA2 2017 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 TEX15Q9BXT5 2789 aa14.1□□□□□ -0.15
SPG7-210ENST00000564409 OR2W5A6NFC9 320 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 ZNF860A6NHJ4 632 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 USP27XA6NNY8 438 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CDC7O00311 574 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CDC123O75794 336 aaPredicted RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 SAT1P21673 171 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 RPL21P46778 160 aaKnown RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 CASP6P55212 293 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CALCOCO2Q13137 446 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 TUBA3CQ13748 450 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 TUBA3EQ6PEY2 450 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 MAATS1Q7Z4T9 603 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 TMPRSS11BQ86T26 416 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 FJX1Q86VR8 437 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 ZBED8Q8IZ13 594 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 ANKRD53Q8N9V6 530 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 FAM98AQ8NCA5 519 aaKnown RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 ELP5Q8TE02 316 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 THAP3Q8WTV1 239 aaPredicted RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 NPLQ9BXD5 320 aaPredicted RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 TRIM31Q9BZY9 425 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 EHD1Q9H4M9 534 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CNOT10Q9H9A5 744 aaKnown RBP14.09□□□□□ -0.15
SPG7-210ENST00000564409 GPAMQ9HCL2 828 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 PRDM9Q9NQV7 894 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 GPRC5BQ9NZH0 403 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 WHRNQ9P202 907 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 TXNDC16Q9P2K2 825 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 COPG2Q9UBF2 871 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 ENTPD4Q9Y227 616 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CREBBPQ92793 2442 aa14.09□□□□□ -0.15
SPG7-210ENST00000564409 CENPEQ02224 2701 aa14.08□□□□□ -0.15
SPG7-210ENST00000564409 A0A088AWK7 358 aa14.08□□□□□ -0.16
SPG7-210ENST00000564409 NPEPPSL1A6NEC2 478 aa14.08□□□□□ -0.16
SPG7-210ENST00000564409 FAM187AA6NFU0 413 aa14.08□□□□□ -0.16
SPG7-210ENST00000564409 ZG16O60844 167 aa14.08□□□□□ -0.16
SPG7-210ENST00000564409 UNC5CO95185 931 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms