RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SNRPG	P62308	76 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	COTL1	Q14019	142 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	GPR153	Q6NV75	609 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SERPINA11	Q86U17	422 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF454	Q8N9F8	522 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	OR4L1	Q8NH43	312 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF408	Q9H9D4	720 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	FCER2	P06734	321 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	BAAT	Q14032	418 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ARHGAP15	Q53QZ3	475 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	FAM182A	Q5T1J6	154 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	MCAT	Q8IVS2	390 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SPOCK3	Q9BQ16	436 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ARVCF	O00192	962 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	XYLB	O75191	536 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ENG	P17813	658 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ALAS2	P22557	587 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	GGT2	P36268	569 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SULT1E1	P49888	294 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF792	Q3KQV3	632 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ARMC6	Q6NXE6	501 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ENTHD1	Q8IYW4	607 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SP110	Q9HB58	689 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	BTRC	Q9Y297	605 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	BOLA1	Q9Y3E2	137 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PPP3CB	P16298	524 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	NCK1	P16333	377 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CD53	P19397	219 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	GGT1	P19440	569 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	VEZF1	Q14119	521 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZMYND11	Q15326	602 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	OR52N1	Q8NH53	320 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PPP1R16B	Q96T49	567 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	NMRK2	Q9NPI5	230 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TSR3	Q9UJK0	312 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PSMB1	P20618	241 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	WNT3A	P56704	352 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	C6orf136	Q5SQH8	315 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	RAB12	Q6IQ22	244 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	BRINP3	Q76B58	766 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	DNAJC22	Q8N4W6	341 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SMARCD2	Q92925	531 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	IL4I1	Q96RQ9	567 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	BABAM2	Q9NXR7	383 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CREBL2	O60519	120 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	RGS11	O94810	467 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	LEXM	Q3ZCV2	418 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	C4orf46	Q504U0	113 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	FRMPD2B	Q6IN97	320 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ADAMTS19	Q8TE59	1207 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SELENOM	Q8WWX9	145 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TAAR8	Q969N4	342 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	NIFK	Q9BYG3	293 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	NEUROD4	Q9HD90	331 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	AMBN	Q9NP70	447 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	OR12D3	Q9UGF7	316 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC6A5	Q9Y345	797 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CST3	P01034	146 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	RPS2	P15880	293 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM236	Q5W0B7	351 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM203	Q969S6	136 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	NTAN1	Q96AB6	310 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	GULP1	Q9UBP9	304 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CACNB2	Q08289	660 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	IRF4	Q15306	451 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	QSOX2	Q6ZRP7	698 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SYNE4	Q8N205	404 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TIFA	Q96CG3	184 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TNKS2	Q9H2K2	1166 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CALML5	Q9NZT1	146 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SC5D	O75845	299 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	FGF1	P05230	155 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ANXA5	P08758	320 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC11A2	P49281	568 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CPT1A	P50416	773 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	OR51M1	Q9H341	326 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PRMT8	Q9NR22	394 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ICE1	Q9Y2F5	2266 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	LPO	P22079	712 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CLDN8	P56748	225 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ZYX	Q15942	572 aa	Known RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	CTF1	Q16619	201 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	METTL7B	Q6UX53	244 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TWIST2	Q8WVJ9	160 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC25A13	Q9UJS0	675 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	AKT3	Q9Y243	479 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ABCD4	O14678	606 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	AANAT	Q16613	207 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	HDDC3	Q8N4P3	179 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM185A	Q8NFB2	350 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PIP5K1A	Q99755	562 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SPIN1	Q9Y657	262 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	SPATA31C2	B4DYI2	1134 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	RGS9	O75916	674 aa	Predicted RBP	4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	PM20D1	Q6GTS8	502 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	RNF149	Q8NC42	400 aa		4.12	□□□□□ -1.75
MACF1-231	ENST00000564288	ABRACL	Q9P1F3	81 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms