RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PPP3R2Q96LZ3 170 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 LRRC37BQ96QE4 947 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 SERPINI1Q99574 410 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 TUBB6Q9BUF5 446 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 MS4A8Q9BY19 250 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 SOHLH2Q9NX45 425 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 VPS29Q9UBQ0 182 aa12.33□□□□□ -0.44
SPG7-209ENST00000564047 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 IGHV5-10-1A0A0J9YXX1 117 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 ATP6AP2A0A1C7CYW4 349 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 MGRN1O60291 552 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 SRPX2O60687 465 aaPredicted RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 ATP6AP2O75787 350 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 UNC5CO95185 931 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 TGFB1P01137 390 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 SERPINA6P08185 405 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 MSL3P1P0C860 447 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 CDK4P11802 303 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 NELFEP18615 380 aaKnown RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 GABRA4P48169 554 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 CYP4F2P78329 520 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 ELF3P78545 371 aaPredicted RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 HMGCS1Q01581 520 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 TUBB3Q13509 450 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 NR6A1Q15406 480 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 TRIP6Q15654 476 aaKnown RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 SMU1Q2TAY7 513 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 SNAP47Q5SQN1 464 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 MANEAQ5SRI9 462 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 TMTC4Q5T4D3 741 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 DEPDC1Q5TB30 811 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 FAM91A1Q658Y4 838 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 ARHGAP22Q7Z5H3 698 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 VN1R4Q7Z5H5 301 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 MCATQ8IVS2 390 aaKnown RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 SLITRK4Q8IW52 837 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 D2HGDHQ8N465 521 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 RNF175Q8N4F7 328 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 CAMKVQ8NCB2 501 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 DEFB124Q8NES8 71 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 NT5CQ8TCD5 201 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 SLC13A3Q8WWT9 602 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 RERGQ96A58 199 aaPredicted RBP12.32□□□□□ -0.44
SPG7-209ENST00000564047 RILPQ96NA2 401 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 OR52B2Q96RD2 323 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 SYNPO2LQ9H987 977 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 PLCL2Q9UPR0 1127 aa12.32□□□□□ -0.44
SPG7-209ENST00000564047 KALRNO60229 2985 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 A8MU76 341 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 H0YGG7 62 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TXNDC9O14530 226 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 NDUFS4O43181 175 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 PEX11AO75192 247 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 SEMA3DO95025 777 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ETHE1O95571 254 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TBX6O95947 436 aaPredicted RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 SERPIND1P05546 499 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 SLC35G6P0C7Q6 338 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LBPP18428 481 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 SEPHS1P49903 392 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 RASSF2P50749 326 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ARFIP1P53367 373 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ARF3P61204 181 aaPredicted RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 ZFP36L1Q07352 338 aaKnown RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 RGS1Q08116 209 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 AP5B1Q2VPB7 878 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LSM12Q3MHD2 195 aaKnown RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 ATP6AP1LQ52LC2 224 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TMEM35AQ53FP2 167 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 C6orf136Q5SQH8 315 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 KHDRBS2Q5VWX1 349 aaKnown RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 FRMPD2BQ6IN97 320 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 OGFOD2Q6N063 350 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 PROSER1Q86XN7 944 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ZNF655Q8N720 491 aaPredicted RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 KLHL29Q96CT2 875 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 CCDC74BQ96LY2 380 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ZNF285Q96NJ3 590 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TMEM74Q96NL1 305 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 RAB3IPQ96QF0 476 aaPredicted RBP12.31□□□□□ -0.44
SPG7-209ENST00000564047 CENPKQ9BS16 269 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms